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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170115869
CENG01056884
288475
Bacteroidota
GCC
Gly
>WENV170115839
CENG01053394
198599
Bacteroidota
GTG
His
>WENV170115505
CENG01023396
281538
Bacteroidota
GAA
Phe
>WENV170115843
CENG01054204
281538
Bacteroidota
GAA
Phe
>WENV170115604
CENG01032966
156605
Bacteroidota
GAC
Val
>WENV170116017
CENG01075275
156605
Bacteroidota
GAC
Val
>WENV170115652
CENG01036732
281336
Bacteroidota
TCC
Gly
>WENV170115399
CENG01017510
305664
Bacteroidota
CAT
Met
>WENV170115617
CENG01033972
320669
Bacteroidota
GAA
Phe
>WENV170116020
CENG01075474
320669
Bacteroidota
GAA
Phe
>WENV170116139
CENG01088047
320669
Bacteroidota
GAA
Phe
>WENV170116287
CENG01106556
320669
Bacteroidota
GAA
Phe
>WENV170116311
CENG01110326
320669
Bacteroidota
GAA
Phe
>WENV170116312
CENG01110495
320669
Bacteroidota
GAA
Phe
>WENV170116471
CENG01124085
320669
Bacteroidota
GAA
Phe
>WENV170116493
CENG01125249
320669
Bacteroidota
GAA
Phe
>WENV170115626
CENG01034834
336507
Bacteroidota
TCC
Gly
>WENV170115649
CENG01036675
336507
Bacteroidota
TCC
Gly
>WENV170116059
CENG01078258
336507
Bacteroidota
TCC
Gly
>WENV170115447
CENG01021062
155808
Bacteroidota
TGG
Pro
>WENV170115490
CENG01022660
155808
Bacteroidota
TGG
Pro
>WENV170115860
CENG01056149
155808
Bacteroidota
TGG
Pro
>WENV170115866
CENG01056704
155808
Bacteroidota
TGG
Pro
>WENV170115879
CENG01057951
155808
Bacteroidota
TGG
Pro
>WENV170116027
CENG01076316
155808
Bacteroidota
TGG
Pro
>WENV170115660
CENG01036995
74253
Bacteroidota
GCT
Ser
>WENV170116297
CENG01108223
121312
Bacteroidota
TAG
Leu
>WENV170115591
CENG01031930
227539
Bacteroidota
GTT
Asn
>WENV170116113
CENG01084399
227539
Bacteroidota
GTT
Asn
>WENV170116387
CENG01117453
227539
Bacteroidota
GTT
Asn
>WENV170115388
CENG01016482
235895
Bacteroidota
GTT
Asn
>WENV170115789
CENG01048303
231584
Bacteroidota
TCT
Arg
>WENV170115407
CENG01017845
347386
Bacteroidota
CCA
Trp
>WENV170115562
CENG01028366
347386
Bacteroidota
CCA
Trp
>WENV170115709
CENG01041103
347386
Bacteroidota
CCA
Trp
>WENV170115721
CENG01042071
347386
Bacteroidota
CCA
Trp
>WENV170115940
CENG01064856
347386
Bacteroidota
CCA
Trp
>WENV170116019
CENG01075444
347386
Bacteroidota
CCA
Trp
>WENV170116102
CENG01083036
347386
Bacteroidota
CCA
Trp
>WENV170116120
CENG01085282
347386
Bacteroidota
CCA
Trp
>WENV170116282
CENG01105523
347386
Bacteroidota
CCA
Trp
>WENV170116454
CENG01122857
347386
Bacteroidota
CCA
Trp
>WENV170116457
CENG01123055
347386
Bacteroidota
CCA
Trp
>WENV170115678
CENG01038561
182234
Bacteroidota
TGT
Thr
>WENV170115231
CENG01005002
183480
Bacteroidota
TGC
Ala
>WENV170115282
CENG01008655
183480
Bacteroidota
TGC
Ala
>WENV170115300
CENG01009524
183480
Bacteroidota
TGC
Ala
>WENV170115929
CENG01063398
183480
Bacteroidota
TGC
Ala
>WENV170115706
CENG01040907
24958
Bacteroidota
GGA
Ser
>WENV170115984
CENG01071178
24958
Bacteroidota
GGA
Ser
>WENV170115653
CENG01036732
408604
Bacteroidota
GGT
Thr
>WENV170116010
CENG01074683
56162
Bacteroidota
TGA
Ser
>WENV170116097
CENG01082755
56162
Bacteroidota
TGA
Ser
>WENV170116424
CENG01120255
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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