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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170125129
CENP01029053
400818
Bacteroidota
TTC
Glu
>WENV170125990
CENP01081412
400818
Bacteroidota
TTC
Glu
>WENV170126184
CENP01096675
400818
Bacteroidota
TTC
Glu
>WENV170126612
CENP01132118
400818
Bacteroidota
TTC
Glu
>WENV170126641
CENP01135864
400818
Bacteroidota
TTC
Glu
>WENV170126772
CENP01149926
400818
Bacteroidota
TTC
Glu
>WENV170125175
CENP01031276
198599
Bacteroidota
GTG
His
>WENV170126148
CENP01093881
198599
Bacteroidota
GTG
His
>WENV170126434
CENP01116032
198599
Bacteroidota
GTG
His
>WENV170125287
CENP01038378
281538
Bacteroidota
GAA
Phe
>WENV170126323
CENP01106663
281538
Bacteroidota
GAA
Phe
>WENV170125021
CENP01021717
156605
Bacteroidota
GAC
Val
>WENV170125102
CENP01027218
156605
Bacteroidota
GAC
Val
>WENV170126566
CENP01127396
156605
Bacteroidota
GAC
Val
>WENV170125133
CENP01029152
23370
Bacteroidota
GGA
Ser
>WENV170126858
CENP01158237
305664
Bacteroidota
CAT
Met
>WENV170124763
CENP01006925
320669
Bacteroidota
GAA
Phe
>WENV170124942
CENP01017538
320669
Bacteroidota
GAA
Phe
>WENV170125893
CENP01074315
320669
Bacteroidota
GAA
Phe
>WENV170126217
CENP01099124
320669
Bacteroidota
GAA
Phe
>WENV170126530
CENP01124758
320669
Bacteroidota
GAA
Phe
>WENV170126614
CENP01132231
320669
Bacteroidota
GAA
Phe
>WENV170127215
CENP01194571
320669
Bacteroidota
GAA
Phe
>WENV170127275
CENP01199123
320669
Bacteroidota
GAA
Phe
>WENV170127917
CENP01238304
320669
Bacteroidota
GAA
Phe
>WENV170127951
CENP01238855
320669
Bacteroidota
GAA
Phe
>WENV170126200
CENP01098210
336507
Bacteroidota
TCC
Gly
>WENV170126476
CENP01119769
402171
Bacteroidota
TTC
Glu
>WENV170127894
CENP01237691
402171
Bacteroidota
TTC
Glu
>WENV170125041
CENP01023204
155808
Bacteroidota
TGG
Pro
>WENV170125123
CENP01028703
155808
Bacteroidota
TGG
Pro
>WENV170125222
CENP01033618
155808
Bacteroidota
TGG
Pro
>WENV170125380
CENP01043026
155808
Bacteroidota
TGG
Pro
>WENV170125398
CENP01044569
155808
Bacteroidota
TGG
Pro
>WENV170125454
CENP01047347
155808
Bacteroidota
TGG
Pro
>WENV170125653
CENP01059613
155808
Bacteroidota
TGG
Pro
>WENV170125682
CENP01061301
155808
Bacteroidota
TGG
Pro
>WENV170125861
CENP01072263
155808
Bacteroidota
TGG
Pro
>WENV170127104
CENP01184856
176812
Bacteroidota
TCT
Arg
>WENV170126221
CENP01099747
21789
Bacteroidota
GGA
Ser
>WENV170124801
CENP01009887
227539
Bacteroidota
GTT
Asn
>WENV170125356
CENP01042124
227539
Bacteroidota
GTT
Asn
>WENV170126019
CENP01083657
227539
Bacteroidota
GTT
Asn
>WENV170126243
CENP01100972
227539
Bacteroidota
GTT
Asn
>WENV170126759
CENP01148308
227539
Bacteroidota
GTT
Asn
>WENV170127037
CENP01178114
227539
Bacteroidota
GTT
Asn
>WENV170127211
CENP01194267
227539
Bacteroidota
GTT
Asn
>WENV170124935
CENP01016851
156596
Bacteroidota
TAC
Val
>WENV170125513
CENP01051125
193718
Bacteroidota
GTC
Asp
>WENV170127519
CENP01217906
193718
Bacteroidota
GTC
Asp
>WENV170125946
CENP01078228
181598
Bacteroidota
GTT
Asn
>WENV170126015
CENP01083389
181598
Bacteroidota
GTT
Asn
>WENV170126199
CENP01098039
181598
Bacteroidota
GTT
Asn
>WENV170125686
CENP01061610
284409
Bacteroidota
CAT
Met
>WENV170125782
CENP01067519
284409
Bacteroidota
CAT
Met
>WENV170127881
CENP01237446
206043
Bacteroidota
GTC
Asp
>WENV170126741
CENP01146854
282831
Bacteroidota
TTT
Lys
>WENV170125679
CENP01061137
183480
Bacteroidota
TGC
Ala
>WENV170126151
CENP01093924
183480
Bacteroidota
TGC
Ala
>WENV170126205
CENP01098412
183480
Bacteroidota
TGC
Ala
>WENV170126229
CENP01100126
183480
Bacteroidota
TGC
Ala
>WENV170126297
CENP01104961
183480
Bacteroidota
TGC
Ala
>WENV170126463
CENP01118468
183480
Bacteroidota
TGC
Ala
>WENV170125369
CENP01042599
24958
Bacteroidota
GGA
Ser
>WENV170125611
CENP01057372
24958
Bacteroidota
GGA
Ser
>WENV170125669
CENP01060653
24958
Bacteroidota
GGA
Ser
>WENV170125832
CENP01070698
156424
Bacteroidota
TGG
Pro
>WENV170127885
CENP01237524
179598
Bacteroidota
CAT
Met
>WENV170128180
CENP01391227
399343
Bacteroidota
TTC
Glu
>WENV170124707
CENP01003422
56162
Bacteroidota
TGA
Ser
>WENV170125031
CENP01022535
56162
Bacteroidota
TGA
Ser
>WENV170125199
CENP01032479
56162
Bacteroidota
TGA
Ser
>WENV170125809
CENP01068873
56162
Bacteroidota
TGA
Ser
>WENV170125922
CENP01077354
56162
Bacteroidota
TGA
Ser
>WENV170126121
CENP01091451
56162
Bacteroidota
TGA
Ser
>WENV170126258
CENP01101955
56162
Bacteroidota
TGA
Ser
>WENV170126644
CENP01136187
56162
Bacteroidota
TGA
Ser
>WENV170125251
CENP01035704
480568
Bacteroidota
GCA
Cys
>WENV170128154
CENP01371164
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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