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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170165825
CEOO01010634
400818
Bacteroidota
TTC
Glu
>WENV170165956
CEOO01020982
400818
Bacteroidota
TTC
Glu
>WENV170166439
CEOO01064003
400818
Bacteroidota
TTC
Glu
>WENV170166443
CEOO01064564
400818
Bacteroidota
TTC
Glu
>WENV170166288
CEOO01049077
288475
Bacteroidota
GCC
Gly
>WENV170166598
CEOO01081503
155808
Bacteroidota
TGG
Pro
>WENV170166347
CEOO01053801
176812
Bacteroidota
TCT
Arg
>WENV170166174
CEOO01040330
21789
Bacteroidota
GGA
Ser
>WENV170167060
CEOO01147789
299065
Bacteroidota
TTG
Gln
>WENV170166245
CEOO01045595
483389
Bacteroidota
GCA
Cys
>WENV170165971
CEOO01022317
21872
Bacteroidota
GGA
Ser
>WENV170166474
CEOO01067471
181598
Bacteroidota
GTT
Asn
>WENV170166106
CEOO01034491
183480
Bacteroidota
TGC
Ala
>WENV170166204
CEOO01042218
183480
Bacteroidota
TGC
Ala
>WENV170166154
CEOO01038223
56162
Bacteroidota
TGA
Ser
>WENV170165893
CEOO01016146
299085
Bacteroidota
TTT
Lys
>WENV170166119
CEOO01035805
299085
Bacteroidota
TTT
Lys
>WENV170166131
CEOO01036663
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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