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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170181847
CEOX01047253
364431
Bacteroidota
TCC
Gly
>WENV170182113
CEOX01067630
364431
Bacteroidota
TCC
Gly
>WENV170181668
CEOX01027072
240785
Bacteroidota
GTC
Asp
>WENV170181845
CEOX01046871
240785
Bacteroidota
GTC
Asp
>WENV170181477
CEOX01008235
130793
Bacteroidota
TAG
Leu
>WENV170182415
CEOX01187803
177083
Bacteroidota
TGT
Thr
>WENV170182204
CEOX01099834
21789
Bacteroidota
GGA
Ser
>WENV170182079
CEOX01065685
299065
Bacteroidota
TTG
Gln
>WENV170181621
CEOX01022002
372845
Bacteroidota
CCA
Trp
>WENV170181941
CEOX01055068
372845
Bacteroidota
CCA
Trp
>WENV170181897
CEOX01051592
361792
Bacteroidota
GAA
Phe
>WENV170182585
CEOX01227114
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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