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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170204749
CEPT01030058
400818
Bacteroidota
TTC
Glu
>WENV170204828
CEPT01037830
364431
Bacteroidota
TCC
Gly
>WENV170204836
CEPT01038105
240785
Bacteroidota
GTC
Asp
>WENV170205787
CEPT01124645
155786
Bacteroidota
TGG
Pro
>WENV170205385
CEPT01085607
402171
Bacteroidota
TTC
Glu
>WENV170204662
CEPT01023724
155808
Bacteroidota
TGG
Pro
>WENV170205959
CEPT01142264
176812
Bacteroidota
TCT
Arg
>WENV170205298
CEPT01076230
227539
Bacteroidota
GTT
Asn
>WENV170205319
CEPT01079113
235895
Bacteroidota
GTT
Asn
>WENV170204779
CEPT01032790
193718
Bacteroidota
GTC
Asp
>WENV170204642
CEPT01021906
372845
Bacteroidota
CCA
Trp
>WENV170204741
CEPT01029815
372845
Bacteroidota
CCA
Trp
>WENV170204839
CEPT01038445
372845
Bacteroidota
CCA
Trp
>WENV170205082
CEPT01059219
361792
Bacteroidota
GAA
Phe
>WENV170205045
CEPT01057292
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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