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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170637111
JFBN01308229
235097
Bacteroidota
TTT
Lys
>WENV170637136
JFBN01308400
235097
Bacteroidota
TTT
Lys
>WENV170637005
JFBN01307370
235102
Bacteroidota
CGT
Thr
>WENV170637317
JFBN01316897
153993
Bacteroidota
GAT
Ile
>WENV170635853
JFBN01010658
46165
Bacteroidota
TGA
Ser
>WENV170638212
JFBN01432913
17323
Bacteroidota
GGA
Ser
>WENV170637122
JFBN01308295
415410
Bacteroidota
TTG
Gln
>WENV170638791
JFBN01561564
136244
Bacteroidota
TAC
Val
>WENV170638790
JFBN01561564
136244
Bacteroidota
TAC
Val
>WENV170638784
JFBN01561543
136244
Bacteroidota
TAC
Val
>WENV170638025
JFBN01398110
136244
Bacteroidota
TAC
Val
>WENV170638024
JFBN01398110
136244
Bacteroidota
TAC
Val
>WENV170638782
JFBN01561525
155123
Bacteroidota
GTT
Asn
>WENV170635929
JFBN01012077
344692
Bacteroidota
GGT
Thr
>WENV170635854
JFBN01010658
344692
Bacteroidota
GGT
Thr
>WENV170636799
JFBN01306589
145504
Bacteroidota
TGT
Thr
>WENV170635861
JFBN01010704
270933
Bacteroidota
CAT
Met
>WENV170636761
JFBN01306093
338124
Bacteroidota
CCG
Arg
>WENV170637087
JFBN01308126
193809
Bacteroidota
CAT
Met
>WENV170635926
JFBN01012058
235165
Bacteroidota
CCA
Trp
>WENV170637050
JFBN01307760
301449
Bacteroidota
CGG
Pro
>WENV170635931
JFBN01012092
303954
Bacteroidota
GCC
Gly
>WENV170635903
JFBN01011831
303954
Bacteroidota
GCC
Gly
>WENV170635902
JFBN01011831
303954
Bacteroidota
GCC
Gly
>WENV170636773
JFBN01306323
144656
Bacteroidota
GTG
His
>WENV170637042
JFBN01307596
235207
Bacteroidota
CAT
Met
>WENV170636798
JFBN01306584
80607
Bacteroidota
GTA
Tyr
>WENV170636554
JFBN01302628
80607
Bacteroidota
GTA
Tyr
>WENV170637269
JFBN01315780
113604
Bacteroidota
>WENV170637040
JFBN01307461
52358
Bacteroidota
TGA
Ser
>WENV170636633
JFBN01304322
154643
Bacteroidota
CAT
Met
>WENV170635970
JFBN01012184
154643
Bacteroidota
CAT
Met
>WENV170635874
JFBN01011024
154643
Bacteroidota
CAT
Met
>WENV170636225
JFBN01087973
144590
Bacteroidota
GTT
Asn
>WENV170637065
JFBN01307964
419272
Bacteroidota
CTG
Gln
>WENV170637127
JFBN01308297
144655
Bacteroidota
GGC
Ala
>WENV170636945
JFBN01307250
144639
Bacteroidota
GGC
Ala
>WENV170637135
JFBN01308380
44852
Bacteroidota
TAA
Leu
>WENV170637281
JFBN01315891
150485
Bacteroidota
GTT
Asn
>WENV170637280
JFBN01315891
150485
Bacteroidota
GTT
Asn
>WENV170636900
JFBN01307171
246641
Bacteroidota
GAA
Phe
>WENV170636706
JFBN01305142
132360
Bacteroidota
GGG
Pro
>WENV170636689
JFBN01304945
132360
Bacteroidota
GGG
Pro
>WENV170636378
JFBN01200254
19317
Bacteroidota
GGA
Ser
>WENV170636912
JFBN01307184
353927
Bacteroidota
TTC
Glu
>WENV170636537
JFBN01302149
353927
Bacteroidota
TTC
Glu
>WENV170635913
JFBN01011931
185921
Bacteroidota
GTC
Asp
>WENV170638898
JFBN01584630
146530
Bacteroidota
TGT
Thr
>WENV170637299
JFBN01315945
414426
Bacteroidota
CTG
Gln
>WENV170637077
JFBN01308039
16224
Bacteroidota
GGA
Ser
>WENV170637237
JFBN01315242
151960
Bacteroidota
GGC
Ala
>WENV170636720
JFBN01305576
151960
Bacteroidota
GGC
Ala
>WENV170635962
JFBN01012160
151960
Bacteroidota
GGC
Ala
>WENV170637066
JFBN01307964
16220
Bacteroidota
GGA
Ser
>WENV170637898
JFBN01369187
338125
Bacteroidota
CCT
Arg
>WENV170637044
JFBN01307741
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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