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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181200471
OERL01000003
243025
Bacteroidota
CAT
Met
>WENV181200876
OERL01020894
136244
Bacteroidota
TAC
Val
>WENV181200639
OERL01001281
235165
Bacteroidota
CCA
Trp
>WENV181200557
OERL01000219
303954
Bacteroidota
GCC
Gly
>WENV181200493
OERL01000015
154643
Bacteroidota
CAT
Met
>WENV181200538
OERL01000144
144639
Bacteroidota
GGC
Ala
>WENV181200902
OERL01026729
338314
Bacteroidota
CCT
Arg
>WENV181200602
OERL01000681
150485
Bacteroidota
GTT
Asn
>WENV181200624
OERL01000973
353927
Bacteroidota
TTC
Glu
>WENV181200487
OERL01000011
353927
Bacteroidota
TTC
Glu
>WENV181200489
OERL01000013
414426
Bacteroidota
CTG
Gln
>WENV181200491
OERL01000014
151960
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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