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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181529359
OGHM01000013
172207
Bacteroidota
GGG
Pro
>WENV181529549
OGHM01000635
400161
Bacteroidota
GGT
Thr
>WENV181529403
OGHM01000113
280557
Bacteroidota
CAT
Met
>WENV181529536
OGHM01000523
201819
Bacteroidota
CAT
Met
>WENV181529539
OGHM01000541
118221
Bacteroidota
CAA
Leu
>WENV181529654
OGHM01001629
118221
Bacteroidota
CAA
Leu
>WENV181529368
OGHM01000033
56493
Bacteroidota
TGA
Ser
>WENV181529374
OGHM01000047
172085
Bacteroidota
TAC
Val
>WENV181529380
OGHM01000060
172085
Bacteroidota
TAC
Val
>WENV181529486
OGHM01000289
56385
Bacteroidota
TGA
Ser
>WENV181529487
OGHM01000289
56385
Bacteroidota
TGA
Ser
>WENV181529529
OGHM01000484
56385
Bacteroidota
TGA
Ser
>WENV181529475
OGHM01000255
57645
Bacteroidota
TGA
Ser
>WENV181529476
OGHM01000255
57645
Bacteroidota
TGA
Ser
>WENV181529603
OGHM01001083
182267
Bacteroidota
GTT
Asn
>WENV181529645
OGHM01001482
182267
Bacteroidota
GTT
Asn
>WENV181529742
OGHM01004373
312035
Bacteroidota
CCA
Trp
>WENV181529648
OGHM01001530
242241
Bacteroidota
GTC
Asp
>WENV181529649
OGHM01001530
242241
Bacteroidota
GTC
Asp
>WENV181529454
OGHM01000192
56072
Bacteroidota
TAA
Leu
>WENV181529461
OGHM01000202
404109
Bacteroidota
CTC
Glu
>WENV181529371
OGHM01000040
46648
Bacteroidota
TAA
Leu
>WENV181529520
OGHM01000437
46648
Bacteroidota
TAA
Leu
>WENV181529701
OGHM01002741
46648
Bacteroidota
TAA
Leu
>WENV181529557
OGHM01000671
187400
Bacteroidota
GTT
Asn
>WENV181529558
OGHM01000671
187400
Bacteroidota
GTT
Asn
>WENV181529750
OGHM01004681
228511
Bacteroidota
GAT
Ile
>WENV181529723
OGHM01003861
178134
Bacteroidota
TGG
Pro
>WENV181529775
OGHM01006968
176817
Bacteroidota
CAT
Met
>WENV181529351
OGHM01000003
191205
Bacteroidota
TGG
Pro
>WENV181529502
OGHM01000365
481328
Bacteroidota
TTG
Gln
>WENV181529515
OGHM01000421
491385
Bacteroidota
TTG
Gln
>WENV181529510
OGHM01000394
69204
Bacteroidota
TGA
Ser
>WENV181529357
OGHM01000013
365112
Bacteroidota
TTT
Lys
>WENV181529516
OGHM01000427
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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