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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182137064
OHKL01000016
235097
Bacteroidota
TTT
Lys
>WENV182137072
OHKL01000023
235097
Bacteroidota
TTT
Lys
>WENV182137142
OHKL01000126
235097
Bacteroidota
TTT
Lys
>WENV182137270
OHKL01000467
235097
Bacteroidota
TTT
Lys
>WENV182137570
OHKL01004457
141635
Bacteroidota
TAC
Val
>WENV182137262
OHKL01000425
235102
Bacteroidota
CGT
Thr
>WENV182137838
OHKL01028310
267954
Bacteroidota
GCC
Gly
>WENV182137606
OHKL01005873
338155
Bacteroidota
CTC
Glu
>WENV182137121
OHKL01000086
343138
Bacteroidota
CCT
Arg
>WENV182137817
OHKL01024668
58715
Bacteroidota
GAG
Leu
>WENV182137372
OHKL01001023
436206
Bacteroidota
TTG
Gln
>WENV182137503
OHKL01002381
145504
Bacteroidota
TGT
Thr
>WENV182137178
OHKL01000182
338124
Bacteroidota
CCG
Arg
>WENV182137272
OHKL01000478
126641
Bacteroidota
TAC
Val
>WENV182137612
OHKL01006198
338132
Bacteroidota
GCA
Cys
>WENV182137210
OHKL01000252
338132
Bacteroidota
GCA
Cys
>WENV182137168
OHKL01000159
338132
Bacteroidota
GCA
Cys
>WENV182137880
OHKL01037425
144688
Bacteroidota
CAT
Met
>WENV182137755
OHKL01016469
235165
Bacteroidota
CCA
Trp
>WENV182137188
OHKL01000224
280660
Bacteroidota
CCA
Trp
>WENV182137843
OHKL01029146
301449
Bacteroidota
CGG
Pro
>WENV182137665
OHKL01008776
144933
Bacteroidota
TCT
Arg
>WENV182137488
OHKL01002271
303954
Bacteroidota
GCC
Gly
>WENV182137088
OHKL01000035
144656
Bacteroidota
GTG
His
>WENV182137128
OHKL01000100
235207
Bacteroidota
CAT
Met
>WENV182137156
OHKL01000140
143169
Bacteroidota
GGG
Pro
>WENV182137385
OHKL01001176
144596
Bacteroidota
GGC
Ala
>WENV182137084
OHKL01000033
80607
Bacteroidota
GTA
Tyr
>WENV182137066
OHKL01000017
80607
Bacteroidota
GTA
Tyr
>WENV182137046
OHKL01000008
144590
Bacteroidota
GTT
Asn
>WENV182137137
OHKL01000112
95559
Bacteroidota
TAG
Leu
>WENV182137071
OHKL01000021
144655
Bacteroidota
GGC
Ala
>WENV182137671
OHKL01009240
144639
Bacteroidota
GGC
Ala
>WENV182137808
OHKL01023164
95875
Bacteroidota
TAG
Leu
>WENV182137867
OHKL01033871
338314
Bacteroidota
CCT
Arg
>WENV182137048
OHKL01000008
44852
Bacteroidota
TAA
Leu
>WENV182137590
OHKL01005305
150485
Bacteroidota
GTT
Asn
>WENV182137141
OHKL01000122
425638
Bacteroidota
CTG
Gln
>WENV182137130
OHKL01000101
425638
Bacteroidota
CTG
Gln
>WENV182137325
OHKL01000636
239647
Bacteroidota
TTT
Lys
>WENV182137619
OHKL01006585
19317
Bacteroidota
GGA
Ser
>WENV182137670
OHKL01009132
353927
Bacteroidota
TTC
Glu
>WENV182137605
OHKL01005873
23696
Bacteroidota
GCT
Ser
>WENV182137431
OHKL01001751
56823
Bacteroidota
TGA
Ser
>WENV182137264
OHKL01000430
56823
Bacteroidota
TGA
Ser
>WENV182137082
OHKL01000029
56823
Bacteroidota
TGA
Ser
>WENV182137126
OHKL01000096
16220
Bacteroidota
GGA
Ser
>WENV182137041
OHKL01000004
338125
Bacteroidota
CCT
Arg
>WENV182137899
OHKL01044208
235129
Bacteroidota
GCC
Gly
>WENV182137081
OHKL01000027
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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