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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182202023
OHPO01000954
235097
Bacteroidota
TTT
Lys
>WENV182201922
OHPO01000230
235102
Bacteroidota
CGT
Thr
>WENV182202609
OHPO01021220
267954
Bacteroidota
GCC
Gly
>WENV182202230
OHPO01003093
243025
Bacteroidota
CAT
Met
>WENV182202004
OHPO01000810
343138
Bacteroidota
CCT
Arg
>WENV182202629
OHPO01024082
17323
Bacteroidota
GGA
Ser
>WENV182202441
OHPO01008599
48053
Bacteroidota
TGA
Ser
>WENV182202030
OHPO01001018
48053
Bacteroidota
TGA
Ser
>WENV182201921
OHPO01000211
48053
Bacteroidota
TGA
Ser
>WENV182202191
OHPO01002271
415410
Bacteroidota
TTG
Gln
>WENV182201907
OHPO01000167
338124
Bacteroidota
CCG
Arg
>WENV182201906
OHPO01000153
146800
Bacteroidota
>WENV182202329
OHPO01004958
338132
Bacteroidota
GCA
Cys
>WENV182202031
OHPO01001023
338132
Bacteroidota
GCA
Cys
>WENV182202060
OHPO01001182
280660
Bacteroidota
CCA
Trp
>WENV182202513
OHPO01012121
144933
Bacteroidota
TCT
Arg
>WENV182202225
OHPO01003031
251266
Bacteroidota
CTT
Lys
>WENV182201860
OHPO01000054
144656
Bacteroidota
GTG
His
>WENV182201840
OHPO01000007
235207
Bacteroidota
CAT
Met
>WENV182201940
OHPO01000352
80607
Bacteroidota
GTA
Tyr
>WENV182201909
OHPO01000174
80607
Bacteroidota
GTA
Tyr
>WENV182202164
OHPO01002022
154643
Bacteroidota
CAT
Met
>WENV182201854
OHPO01000038
144590
Bacteroidota
GTT
Asn
>WENV182201959
OHPO01000419
95559
Bacteroidota
TAG
Leu
>WENV182202165
OHPO01002023
419272
Bacteroidota
CTG
Gln
>WENV182201913
OHPO01000188
144655
Bacteroidota
GGC
Ala
>WENV182202767
OHPO01047233
338164
Bacteroidota
TTC
Glu
>WENV182202020
OHPO01000930
44852
Bacteroidota
TAA
Leu
>WENV182202796
OHPO01055602
147439
Bacteroidota
TCT
Arg
>WENV182202611
OHPO01021444
411550
Bacteroidota
CTG
Gln
>WENV182202129
OHPO01001709
132360
Bacteroidota
GGG
Pro
>WENV182202114
OHPO01001578
353927
Bacteroidota
TTC
Glu
>WENV182202279
OHPO01003894
414426
Bacteroidota
CTG
Gln
>WENV182201861
OHPO01000054
16224
Bacteroidota
GGA
Ser
>WENV182201973
OHPO01000535
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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