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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182298559
OHWJ01000325
95987
Bacteroidota
CAA
Leu
>WENV182298571
OHWJ01000493
95987
Bacteroidota
CAA
Leu
>WENV182298834
OHWJ01019801
339412
Bacteroidota
GGT
Thr
>WENV182298565
OHWJ01000419
97336
Bacteroidota
CAG
Leu
>WENV182298499
OHWJ01000036
394247
Bacteroidota
CTC
Glu
>WENV182298500
OHWJ01000036
394247
Bacteroidota
CTC
Glu
>WENV182298633
OHWJ01002022
394247
Bacteroidota
CTC
Glu
>WENV182298663
OHWJ01002689
237797
Bacteroidota
CCA
Trp
>WENV182298781
OHWJ01010970
412479
Bacteroidota
TTG
Gln
>WENV182298530
OHWJ01000131
147147
Bacteroidota
GTG
His
>WENV182298529
OHWJ01000131
147147
Bacteroidota
GTG
His
>WENV182298652
OHWJ01002454
146800
Bacteroidota
>WENV182298531
OHWJ01000144
37076
Bacteroidota
TAA
Leu
>WENV182298520
OHWJ01000062
37076
Bacteroidota
TAA
Leu
>WENV182298654
OHWJ01002542
113604
Bacteroidota
>WENV182298581
OHWJ01000664
412235
Bacteroidota
>WENV182298690
OHWJ01003892
95986
Bacteroidota
GTA
Tyr
>WENV182298787
OHWJ01011674
50727
Bacteroidota
TGA
Ser
>WENV182298672
OHWJ01003126
146764
Bacteroidota
GTC
Asp
>WENV182298688
OHWJ01003794
127023
Bacteroidota
GGG
Pro
>WENV182298495
OHWJ01000035
313363
Bacteroidota
GAA
Phe
>WENV182298489
OHWJ01000016
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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