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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182423048
OIHA01000014
235097
Bacteroidota
TTT
Lys
>WENV182423152
OIHA01002194
235102
Bacteroidota
CGT
Thr
>WENV182423174
OIHA01004674
338155
Bacteroidota
CTC
Glu
>WENV182423193
OIHA01007333
343138
Bacteroidota
CCT
Arg
>WENV182423188
OIHA01006557
95618
Bacteroidota
TAG
Leu
>WENV182423148
OIHA01001978
338486
Bacteroidota
CAT
Met
>WENV182423096
OIHA01000287
415410
Bacteroidota
TTG
Gln
>WENV182423133
OIHA01000883
415410
Bacteroidota
TTG
Gln
>WENV182423134
OIHA01000960
411543
Bacteroidota
CTG
Gln
>WENV182423164
OIHA01003574
59689
Bacteroidota
CAG
Leu
>WENV182423156
OIHA01002757
235182
Bacteroidota
>WENV182423058
OIHA01000031
338124
Bacteroidota
CCG
Arg
>WENV182423165
OIHA01003785
238121
Bacteroidota
CTT
Lys
>WENV182423143
OIHA01001225
338132
Bacteroidota
GCA
Cys
>WENV182423137
OIHA01001032
338132
Bacteroidota
GCA
Cys
>WENV182423119
OIHA01000536
144688
Bacteroidota
CAT
Met
>WENV182423166
OIHA01003785
45423
Bacteroidota
TGA
Ser
>WENV182423175
OIHA01004945
58714
Bacteroidota
CAA
Leu
>WENV182423066
OIHA01000053
144656
Bacteroidota
GTG
His
>WENV182423075
OIHA01000071
235207
Bacteroidota
CAT
Met
>WENV182423150
OIHA01002189
144659
Bacteroidota
GTG
His
>WENV182423141
OIHA01001143
80607
Bacteroidota
GTA
Tyr
>WENV182423147
OIHA01001735
16999
Bacteroidota
GGA
Ser
>WENV182423171
OIHA01004347
80614
Bacteroidota
>WENV182423071
OIHA01000063
144590
Bacteroidota
GTT
Asn
>WENV182423070
OIHA01000063
144590
Bacteroidota
GTT
Asn
>WENV182423084
OIHA01000158
95559
Bacteroidota
TAG
Leu
>WENV182423080
OIHA01000106
419272
Bacteroidota
CTG
Gln
>WENV182423076
OIHA01000077
144655
Bacteroidota
GGC
Ala
>WENV182423178
OIHA01006005
338164
Bacteroidota
TTC
Glu
>WENV182423145
OIHA01001239
338314
Bacteroidota
CCT
Arg
>WENV182423055
OIHA01000027
44852
Bacteroidota
TAA
Leu
>WENV182423149
OIHA01001986
147439
Bacteroidota
TCT
Arg
>WENV182423160
OIHA01003337
411550
Bacteroidota
CTG
Gln
>WENV182423094
OIHA01000276
50727
Bacteroidota
TGA
Ser
>WENV182423135
OIHA01000965
425638
Bacteroidota
CTG
Gln
>WENV182423069
OIHA01000061
16224
Bacteroidota
GGA
Ser
>WENV182423072
OIHA01000070
16220
Bacteroidota
GGA
Ser
>WENV182423130
OIHA01000744
338125
Bacteroidota
CCT
Arg
>WENV182423202
OIHA01008840
235129
Bacteroidota
GCC
Gly
>WENV182423153
OIHA01002246
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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