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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182486976
OIRU01000043
117741
Bacteroidota
TAG
Leu
>WENV182487015
OIRU01000270
398829
Bacteroidota
CCT
Arg
>WENV182487051
OIRU01000522
404226
Bacteroidota
CCT
Arg
>WENV182487009
OIRU01000225
175904
Bacteroidota
CGG
Pro
>WENV182486998
OIRU01000143
280553
Bacteroidota
TTT
Lys
>WENV182486967
OIRU01000030
280557
Bacteroidota
CAT
Met
>WENV182486944
OIRU01000003
20206
Bacteroidota
GGA
Ser
>WENV182487050
OIRU01000522
398871
Bacteroidota
TTC
Glu
>WENV182486941
OIRU01000002
201819
Bacteroidota
CAT
Met
>WENV182486956
OIRU01000013
56493
Bacteroidota
TGA
Ser
>WENV182487044
OIRU01000471
56493
Bacteroidota
TGA
Ser
>WENV182487046
OIRU01000497
175906
Bacteroidota
GTG
His
>WENV182486957
OIRU01000013
175903
Bacteroidota
GTG
His
>WENV182486952
OIRU01000010
351598
Bacteroidota
CGG
Pro
>WENV182487032
OIRU01000385
118089
Bacteroidota
TAG
Leu
>WENV182487010
OIRU01000225
280530
Bacteroidota
CCA
Trp
>WENV182487138
OIRU01007196
175936
Bacteroidota
CAT
Met
>WENV182487060
OIRU01000672
203954
Bacteroidota
GTC
Asp
>WENV182487061
OIRU01000672
203954
Bacteroidota
GTC
Asp
>WENV182487105
OIRU01002840
20449
Bacteroidota
GGA
Ser
>WENV182487120
OIRU01003883
20449
Bacteroidota
GGA
Ser
>WENV182486981
OIRU01000066
175902
Bacteroidota
GGC
Ala
>WENV182487078
OIRU01001080
480404
Bacteroidota
TTG
Gln
>WENV182486960
OIRU01000019
280451
Bacteroidota
CGT
Thr
>WENV182486949
OIRU01000005
99847
Bacteroidota
GTA
Tyr
>WENV182487002
OIRU01000165
399200
Bacteroidota
CAT
Met
>WENV182486943
OIRU01000003
488746
Bacteroidota
CTG
Gln
>WENV182487093
OIRU01001873
399026
Bacteroidota
CCT
Arg
>WENV182487003
OIRU01000170
280478
Bacteroidota
GCC
Gly
>WENV182486983
OIRU01000069
175844
Bacteroidota
GGC
Ala
>WENV182487103
OIRU01002679
280532
Bacteroidota
>WENV182487085
OIRU01001645
73011
Bacteroidota
CAA
Leu
>WENV182487134
OIRU01006483
480318
Bacteroidota
CTG
Gln
>WENV182486985
OIRU01000074
398828
Bacteroidota
CCG
Arg
>WENV182487033
OIRU01000428
74084
Bacteroidota
CAG
Leu
>WENV182487030
OIRU01000383
480325
Bacteroidota
CTG
Gln
>WENV182487031
OIRU01000383
480325
Bacteroidota
CTG
Gln
>WENV182487126
OIRU01004879
400088
Bacteroidota
GGT
Thr
>WENV182486968
OIRU01000034
69204
Bacteroidota
TGA
Ser
>WENV182486947
OIRU01000004
280446
Bacteroidota
TTT
Lys
>WENV182486959
OIRU01000016
484496
Bacteroidota
TTG
Gln
>WENV182486958
OIRU01000013
27502
Bacteroidota
GGA
Ser
>WENV182487100
OIRU01002341
285750
Bacteroidota
CCC
Gly
>WENV182486997
OIRU01000139
365112
Bacteroidota
TTT
Lys
>WENV182487067
OIRU01000788
365112
Bacteroidota
TTT
Lys
>WENV182486961
OIRU01000021
398836
Bacteroidota
GCA
Cys
>WENV182486988
OIRU01000080
398836
Bacteroidota
GCA
Cys
>WENV182487035
OIRU01000435
398836
Bacteroidota
GCA
Cys
>WENV182486945
OIRU01000003
170323
Bacteroidota
GGG
Pro
>WENV182487006
OIRU01000217
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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