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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182911456
OKTL01000751
235102
Bacteroidota
CGT
Thr
>WENV182911353
OKTL01000258
144657
Bacteroidota
CGG
Pro
>WENV182911641
OKTL01003064
243025
Bacteroidota
CAT
Met
>WENV182911854
OKTL01009217
243025
Bacteroidota
CAT
Met
>WENV182912048
OKTL01025447
338155
Bacteroidota
CTC
Glu
>WENV182911951
OKTL01014990
339341
Bacteroidota
GGT
Thr
>WENV182911417
OKTL01000534
343138
Bacteroidota
CCT
Arg
>WENV182911746
OKTL01005091
58715
Bacteroidota
GAG
Leu
>WENV182911568
OKTL01001825
46165
Bacteroidota
TGA
Ser
>WENV182911644
OKTL01003137
17323
Bacteroidota
GGA
Ser
>WENV182911512
OKTL01001202
338486
Bacteroidota
CAT
Met
>WENV182911478
OKTL01000927
338486
Bacteroidota
CAT
Met
>WENV182911541
OKTL01001494
415410
Bacteroidota
TTG
Gln
>WENV182911380
OKTL01000356
59689
Bacteroidota
CAG
Leu
>WENV182911866
OKTL01010383
341950
Bacteroidota
>WENV182911753
OKTL01005460
235203
Bacteroidota
TTT
Lys
>WENV182911360
OKTL01000280
338132
Bacteroidota
GCA
Cys
>WENV182911286
OKTL01000101
58714
Bacteroidota
CAA
Leu
>WENV182912082
OKTL01029696
280660
Bacteroidota
CCA
Trp
>WENV182911658
OKTL01003507
235207
Bacteroidota
CAT
Met
>WENV182911321
OKTL01000185
144659
Bacteroidota
GTG
His
>WENV182911463
OKTL01000806
235180
Bacteroidota
CCA
Trp
>WENV182911354
OKTL01000258
235180
Bacteroidota
CCA
Trp
>WENV182911748
OKTL01005144
80614
Bacteroidota
>WENV182911811
OKTL01007583
154643
Bacteroidota
CAT
Met
>WENV182911584
OKTL01002128
95559
Bacteroidota
TAG
Leu
>WENV182911242
OKTL01000046
419272
Bacteroidota
CTG
Gln
>WENV182911792
OKTL01006683
144655
Bacteroidota
GGC
Ala
>WENV182911306
OKTL01000141
338164
Bacteroidota
TTC
Glu
>WENV182911302
OKTL01000136
95875
Bacteroidota
TAG
Leu
>WENV182911794
OKTL01006755
240012
Bacteroidota
CCC
Gly
>WENV182911373
OKTL01000342
240012
Bacteroidota
CCC
Gly
>WENV182911381
OKTL01000362
44852
Bacteroidota
TAA
Leu
>WENV182911339
OKTL01000221
147439
Bacteroidota
TCT
Arg
>WENV182911223
OKTL01000028
411550
Bacteroidota
CTG
Gln
>WENV182911688
OKTL01004187
50727
Bacteroidota
TGA
Ser
>WENV182912052
OKTL01025611
353927
Bacteroidota
TTC
Glu
>WENV182912140
OKTL01039694
185921
Bacteroidota
GTC
Asp
>WENV182911954
OKTL01015371
185921
Bacteroidota
GTC
Asp
>WENV182911374
OKTL01000345
185921
Bacteroidota
GTC
Asp
>WENV182911455
OKTL01000744
23696
Bacteroidota
GCT
Ser
>WENV182911721
OKTL01004790
414426
Bacteroidota
CTG
Gln
>WENV182911407
OKTL01000456
16224
Bacteroidota
GGA
Ser
>WENV182911243
OKTL01000046
16220
Bacteroidota
GGA
Ser
>WENV182911196
OKTL01000013
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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