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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590950
OOCX01006888
235102
Bacteroidota
CGT
Thr
>WENV183591087
OOCX01016336
267954
Bacteroidota
GCC
Gly
>WENV183590933
OOCX01006399
144657
Bacteroidota
CGG
Pro
>WENV183590241
OOCX01000114
243025
Bacteroidota
CAT
Met
>WENV183590533
OOCX01000784
243025
Bacteroidota
CAT
Met
>WENV183590594
OOCX01001125
338155
Bacteroidota
CTC
Glu
>WENV183591030
OOCX01011915
153993
Bacteroidota
GAT
Ile
>WENV183590437
OOCX01000455
343138
Bacteroidota
CCT
Arg
>WENV183590825
OOCX01003705
58715
Bacteroidota
GAG
Leu
>WENV183590771
OOCX01002817
17323
Bacteroidota
GGA
Ser
>WENV183590685
OOCX01001773
338486
Bacteroidota
CAT
Met
>WENV183590417
OOCX01000401
415410
Bacteroidota
TTG
Gln
>WENV183590804
OOCX01003371
344692
Bacteroidota
GGT
Thr
>WENV183590900
OOCX01005201
341950
Bacteroidota
>WENV183590562
OOCX01000919
338124
Bacteroidota
CCG
Arg
>WENV183590878
OOCX01004650
238121
Bacteroidota
CTT
Lys
>WENV183590944
OOCX01006720
126641
Bacteroidota
TAC
Val
>WENV183590164
OOCX01000055
338132
Bacteroidota
GCA
Cys
>WENV183590329
OOCX01000209
144656
Bacteroidota
GTG
His
>WENV183590502
OOCX01000679
235207
Bacteroidota
CAT
Met
>WENV183590431
OOCX01000442
235207
Bacteroidota
CAT
Met
>WENV183591040
OOCX01012385
80607
Bacteroidota
GTA
Tyr
>WENV183590746
OOCX01002553
80607
Bacteroidota
GTA
Tyr
>WENV183590801
OOCX01003314
80614
Bacteroidota
>WENV183590328
OOCX01000204
52358
Bacteroidota
TGA
Ser
>WENV183590163
OOCX01000055
52358
Bacteroidota
TGA
Ser
>WENV183590731
OOCX01002232
154643
Bacteroidota
CAT
Met
>WENV183590792
OOCX01003195
419272
Bacteroidota
CTG
Gln
>WENV183590874
OOCX01004532
144655
Bacteroidota
GGC
Ala
>WENV183590122
OOCX01000028
127277
Bacteroidota
TAC
Val
>WENV183590684
OOCX01001768
95875
Bacteroidota
TAG
Leu
>WENV183590891
OOCX01004875
151121
Bacteroidota
CAT
Met
>WENV183590721
OOCX01002104
44852
Bacteroidota
TAA
Leu
>WENV183590362
OOCX01000291
44852
Bacteroidota
TAA
Leu
>WENV183591147
OOCX01021977
280513
Bacteroidota
TTT
Lys
>WENV183590267
OOCX01000134
150485
Bacteroidota
GTT
Asn
>WENV183590266
OOCX01000134
150485
Bacteroidota
GTT
Asn
>WENV183590590
OOCX01001086
132360
Bacteroidota
GGG
Pro
>WENV183590821
OOCX01003659
425638
Bacteroidota
CTG
Gln
>WENV183590543
OOCX01000820
425638
Bacteroidota
CTG
Gln
>WENV183590888
OOCX01004804
19317
Bacteroidota
GGA
Ser
>WENV183590124
OOCX01000028
353927
Bacteroidota
TTC
Glu
>WENV183590870
OOCX01004459
414426
Bacteroidota
CTG
Gln
>WENV183590330
OOCX01000209
16224
Bacteroidota
GGA
Ser
>WENV183590561
OOCX01000918
338125
Bacteroidota
CCT
Arg
>WENV183590753
OOCX01002693
235129
Bacteroidota
GCC
Gly
>WENV183590672
OOCX01001675
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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