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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1012200
SRR020493.212778
291910
Bacteroidota
TTG
Gln
>SRA1012591
SRR020493.362351
400818
Bacteroidota
TTC
Glu
>SRA1012265
SRR020493.237152
400818
Bacteroidota
TTC
Glu
>SRA1011799
SRR020493.82592
305664
Bacteroidota
CAT
Met
>SRA1012104
SRR020493.181148
193718
Bacteroidota
GTC
Asp
>SRA1012443
SRR020493.314681
183480
Bacteroidota
TGC
Ala
>SRA1012229
SRR020493.222447
181598
Bacteroidota
GTT
Asn
>SRA1012002
SRR020493.150512
181598
Bacteroidota
GTT
Asn
>SRA1012272
SRR020493.238404
155808
Bacteroidota
TGG
Pro
>SRA1012105
SRR020493.181289
155808
Bacteroidota
TGG
Pro
>SRA1011712
SRR020493.53468
155808
Bacteroidota
TGG
Pro
>SRA1012825
SRR020493.443124
176812
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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