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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183697813
OUNK010146817
145694
Betaproteobacteria
ACG
Arg
>WENV183698062
OUNK010986328
172608
Betaproteobacteria
TTG
Gln
>WENV183697739
OUNK010050420
146768
Betaproteobacteria
CAT
Met
>WENV183697540
OUNK010000634
267416
Betaproteobacteria
TGT
Thr
>WENV183697575
OUNK010002539
267416
Betaproteobacteria
TGT
Thr
>WENV183697591
OUNK010002873
99249
Betaproteobacteria
CAA
Leu
>WENV183697922
OUNK010373155
292518
Betaproteobacteria
TTT
Lys
>WENV183697876
OUNK010228191
86049
Betaproteobacteria
GTA
Tyr
>WENV183697809
OUNK010144574
86049
Betaproteobacteria
GTA
Tyr
>WENV183697722
OUNK010033125
421327
Betaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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