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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725968
PJQF01050457
237516
Betaproteobacteria
GCC
Gly
>WENV183725967
PJQF01050385
239252
Betaproteobacteria
TTT
Lys
>WENV183725683
PJQF01007678
152292
Betaproteobacteria
TTG
Gln
>WENV183725592
PJQF01002732
145694
Betaproteobacteria
ACG
Arg
>WENV183726167
PJQF01099327
145694
Betaproteobacteria
ACG
Arg
>WENV183725696
PJQF01008509
147079
Betaproteobacteria
TTG
Gln
>WENV183725645
PJQF01004679
237459
Betaproteobacteria
CTT
Lys
>WENV183726099
PJQF01083946
249068
Betaproteobacteria
CGC
Ala
>WENV183725573
PJQF01001997
95951
Betaproteobacteria
CAA
Leu
>WENV183726452
PJQF01205562
146726
Betaproteobacteria
TCT
Arg
>WENV183725918
PJQF01038034
248203
Betaproteobacteria
GAA
Phe
>WENV183725628
PJQF01004216
412422
Betaproteobacteria
GCA
Cys
>WENV183726500
PJQF01229521
154591
Betaproteobacteria
CAT
Met
>WENV183725591
PJQF01002732
153173
Betaproteobacteria
CAT
Met
>WENV183726011
PJQF01060103
4907
Betaproteobacteria
GCT
Ser
>WENV183725822
PJQF01020840
236872
Betaproteobacteria
CCA
Trp
>WENV183725646
PJQF01004747
23608
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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