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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183703794
PDVJ01047632
174389
Campylobacterota
GAT
Ile
>WENV183703812
PDVJ01050192
174389
Campylobacterota
GAT
Ile
>WENV183703861
PDVJ01055805
174389
Campylobacterota
GAT
Ile
>WENV183703928
PDVJ01070343
174389
Campylobacterota
GAT
Ile
>WENV183702768
PDVJ01000075
149527
Campylobacterota
CAT
Met
>WENV183703256
PDVJ01006728
149527
Campylobacterota
CAT
Met
>WENV183703974
PDVJ01080320
149527
Campylobacterota
CAT
Met
>WENV183703352
PDVJ01010568
161529
Campylobacterota
CAT
Met
>WENV183702734
PDVJ01000005
155979
Campylobacterota
TCC
Gly
>WENV183702811
PDVJ01000230
155979
Campylobacterota
TCC
Gly
>WENV183703272
PDVJ01007363
155979
Campylobacterota
TCC
Gly
>WENV183703427
PDVJ01013622
155979
Campylobacterota
TCC
Gly
>WENV183703696
PDVJ01036252
155979
Campylobacterota
TCC
Gly
>WENV183703197
PDVJ01004970
340892
Campylobacterota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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