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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1036578
SRR035089.553928
282274
Chlorobiota
CGC
Ala
>SRA1035837
SRR035089.385362
282274
Chlorobiota
CGC
Ala
>SRA1035723
SRR035089.362304
282274
Chlorobiota
CGC
Ala
>SRA1035601
SRR035089.338605
282274
Chlorobiota
CGC
Ala
>SRA1034766
SRR035089.169153
282274
Chlorobiota
CGC
Ala
>SRA1035182
SRR035089.255324
281169
Chlorobiota
CAT
Met
>SRA1035626
SRR035089.342769
282263
Chlorobiota
TTT
Lys
>SRA1035095
SRR035089.237058
282263
Chlorobiota
TTT
Lys
>SRA1035006
SRR035089.217438
282263
Chlorobiota
TTT
Lys
>SRA1034699
SRR035089.155639
282263
Chlorobiota
TTT
Lys
>SRA1035641
SRR035089.347245
282414
Chlorobiota
TGC
Ala
>SRA1034602
SRR035089.133175
176477
Chlorobiota
CAT
Met
>SRA1034193
SRR035089.18931
176477
Chlorobiota
CAT
Met
>SRA1035693
SRR035089.355870
177501
Chlorobiota
GTG
His
>SRA1036591
SRR035089.556216
282094
Chlorobiota
GGT
Thr
>SRA1036340
SRR035089.498190
282094
Chlorobiota
GGT
Thr
>SRA1035694
SRR035089.356123
177726
Chlorobiota
CAT
Met
>SRA1035402
SRR035089.298918
177726
Chlorobiota
CAT
Met
>SRA1036473
SRR035089.530336
118002
Chlorobiota
CAG
Leu
>SRA1035625
SRR035089.342675
118002
Chlorobiota
CAG
Leu
>SRA1034262
SRR035089.39790
118002
Chlorobiota
CAG
Leu
>SRA1036152
SRR035089.456956
282471
Chlorobiota
CGG
Pro
>SRA1036134
SRR035089.452115
177570
Chlorobiota
GGG
Pro
>SRA1034936
SRR035089.202694
177570
Chlorobiota
GGG
Pro
>SRA1034439
SRR035089.96474
177570
Chlorobiota
GGG
Pro
>SRA1036037
SRR035089.431527
155915
Chlorobiota
GTC
Asp
>SRA1035029
SRR035089.222057
155915
Chlorobiota
GTC
Asp
>SRA1034767
SRR035089.169206
155915
Chlorobiota
GTC
Asp
>SRA1034642
SRR035089.142754
155915
Chlorobiota
GTC
Asp
>SRA1034615
SRR035089.137419
155915
Chlorobiota
GTC
Asp
>SRA1034527
SRR035089.116170
155915
Chlorobiota
GTC
Asp
>SRA1035691
SRR035089.355870
282186
Chlorobiota
TGG
Pro
>SRA1034314
SRR035089.54866
282186
Chlorobiota
TGG
Pro
>SRA1035348
SRR035089.287863
177626
Chlorobiota
TAC
Val
>SRA1034808
SRR035089.177869
177626
Chlorobiota
TAC
Val
>SRA1035695
SRR035089.356123
282373
Chlorobiota
CCC
Gly
>SRA1035403
SRR035089.298918
282373
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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