This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1047138
SRR035093.464122
282274
Chlorobiota
CGC
Ala
>SRA1046927
SRR035093.419966
282274
Chlorobiota
CGC
Ala
>SRA1046580
SRR035093.336421
282274
Chlorobiota
CGC
Ala
>SRA1046076
SRR035093.230868
282274
Chlorobiota
CGC
Ala
>SRA1046024
SRR035093.218587
282274
Chlorobiota
CGC
Ala
>SRA1045876
SRR035093.186126
282274
Chlorobiota
CGC
Ala
>SRA1047407
SRR035093.531693
281169
Chlorobiota
CAT
Met
>SRA1047472
SRR035093.548684
282263
Chlorobiota
TTT
Lys
>SRA1045171
SRR035093.18861
282263
Chlorobiota
TTT
Lys
>SRA1047178
SRR035093.476891
282414
Chlorobiota
TGC
Ala
>SRA1045866
SRR035093.184261
176477
Chlorobiota
CAT
Met
>SRA1045699
SRR035093.152458
176477
Chlorobiota
CAT
Met
>SRA1046978
SRR035093.429532
177501
Chlorobiota
GTG
His
>SRA1046211
SRR035093.253838
177501
Chlorobiota
GTG
His
>SRA1046022
SRR035093.217743
177501
Chlorobiota
GTG
His
>SRA1047311
SRR035093.507441
282094
Chlorobiota
GGT
Thr
>SRA1046202
SRR035093.253138
282094
Chlorobiota
GGT
Thr
>SRA1047507
SRR035093.560476
284284
Chlorobiota
GGC
Ala
>SRA1045413
SRR035093.88361
284284
Chlorobiota
GGC
Ala
>SRA1047564
SRR035093.580943
177726
Chlorobiota
CAT
Met
>SRA1047518
SRR035093.564664
177726
Chlorobiota
CAT
Met
>SRA1045809
SRR035093.173783
177726
Chlorobiota
CAT
Met
>SRA1047427
SRR035093.536187
118002
Chlorobiota
CAG
Leu
>SRA1047413
SRR035093.532810
118002
Chlorobiota
CAG
Leu
>SRA1047379
SRR035093.528579
118002
Chlorobiota
CAG
Leu
>SRA1046863
SRR035093.401634
118002
Chlorobiota
CAG
Leu
>SRA1046459
SRR035093.313301
118002
Chlorobiota
CAG
Leu
>SRA1046280
SRR035093.269558
118002
Chlorobiota
CAG
Leu
>SRA1046141
SRR035093.244001
118002
Chlorobiota
CAG
Leu
>SRA1046015
SRR035093.217155
118002
Chlorobiota
CAG
Leu
>SRA1045647
SRR035093.140781
118002
Chlorobiota
CAG
Leu
>SRA1045558
SRR035093.121875
118002
Chlorobiota
CAG
Leu
>SRA1045459
SRR035093.98521
118002
Chlorobiota
CAG
Leu
>SRA1045281
SRR035093.55137
118002
Chlorobiota
CAG
Leu
>SRA1045277
SRR035093.51815
282471
Chlorobiota
CGG
Pro
>SRA1047235
SRR035093.491100
177570
Chlorobiota
GGG
Pro
>SRA1047223
SRR035093.487213
155915
Chlorobiota
GTC
Asp
>SRA1046134
SRR035093.243331
155915
Chlorobiota
GTC
Asp
>SRA1045961
SRR035093.206390
155915
Chlorobiota
GTC
Asp
>SRA1045659
SRR035093.142692
155915
Chlorobiota
GTC
Asp
>SRA1047195
SRR035093.479804
282186
Chlorobiota
TGG
Pro
>SRA1046940
SRR035093.422977
282186
Chlorobiota
TGG
Pro
>SRA1046457
SRR035093.313057
177626
Chlorobiota
TAC
Val
>SRA1046083
SRR035093.232459
177626
Chlorobiota
TAC
Val
>SRA1045967
SRR035093.206923
177626
Chlorobiota
TAC
Val
>SRA1045788
SRR035093.169739
177626
Chlorobiota
TAC
Val
>SRA1047565
SRR035093.580943
282373
Chlorobiota
CCC
Gly
>SRA1047519
SRR035093.564664
282373
Chlorobiota
CCC
Gly
>SRA1046989
SRR035093.430227
282373
Chlorobiota
CCC
Gly
>SRA1045810
SRR035093.173783
282373
Chlorobiota
CCC
Gly
>SRA1045215
SRR035093.32691
282373
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK