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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101139
AFSR01004962
289441
Cyanobacteriota
GAA
Phe
>WENV170000796
AFSR01004962
289441
Cyanobacteriota
GAA
Phe
>WENV11100883
AFSR01000140
141955
Cyanobacteriota
GAG
Leu
>WENV11101086
AFSR01002993
141955
Cyanobacteriota
GAG
Leu
>WENV170000540
AFSR01000140
141955
Cyanobacteriota
GAG
Leu
>WENV170000743
AFSR01002993
141955
Cyanobacteriota
GAG
Leu
>WENV11100895
AFSR01000227
287557
Cyanobacteriota
GAA
Phe
>WENV170000552
AFSR01000227
287557
Cyanobacteriota
GAA
Phe
>WENV11101245
AFSR01007413
119062
Cyanobacteriota
GTA
Tyr
>WENV170000902
AFSR01007413
119062
Cyanobacteriota
GTA
Tyr
>WENV11101141
AFSR01005034
4100
Cyanobacteriota
GCT
Ser
>WENV170000798
AFSR01005034
4100
Cyanobacteriota
GCT
Ser
>WENV11100850
AFSR01000022
58760
Cyanobacteriota
GGA
Ser
>WENV11100865
AFSR01000052
58760
Cyanobacteriota
GGA
Ser
>WENV11101169
AFSR01005854
58760
Cyanobacteriota
GGA
Ser
>WENV170000507
AFSR01000022
58760
Cyanobacteriota
GGA
Ser
>WENV170000522
AFSR01000052
58760
Cyanobacteriota
GGA
Ser
>WENV170000826
AFSR01005854
58760
Cyanobacteriota
GGA
Ser
>WENV11100902
AFSR01000252
404673
Cyanobacteriota
CAT
Met
>WENV170000559
AFSR01000252
404673
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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