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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170122223
CENN01057871
208578
Cyanobacteriota
CGG
Pro
>WENV170122143
CENN01050260
30885
Cyanobacteriota
GGA
Ser
>WENV170121938
CENN01031671
118720
Cyanobacteriota
CAA
Leu
>WENV170122655
CENN01151926
400473
Cyanobacteriota
GAC
Val
>WENV170121711
CENN01010798
285848
Cyanobacteriota
CAT
Met
>WENV170121599
CENN01002471
180925
Cyanobacteriota
ACG
Arg
>WENV170121837
CENN01022555
401929
Cyanobacteriota
TTG
Gln
>WENV170121979
CENN01035613
291400
Cyanobacteriota
GTG
His
>WENV170121736
CENN01013872
46946
Cyanobacteriota
TAA
Leu
>WENV170122079
CENN01045032
185187
Cyanobacteriota
CCG
Arg
>WENV170121908
CENN01029636
283431
Cyanobacteriota
GTG
His
>WENV170122300
CENN01067029
283431
Cyanobacteriota
GTG
His
>WENV170122823
CENN01194342
410287
Cyanobacteriota
CCC
Gly
>WENV170122172
CENN01052368
118688
Cyanobacteriota
TAG
Leu
>WENV170121654
CENN01006425
177076
Cyanobacteriota
GTC
Asp
>WENV170122352
CENN01073246
177076
Cyanobacteriota
GTC
Asp
>WENV170122819
CENN01194037
399503
Cyanobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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