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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170126488
CENP01120871
208578
Cyanobacteriota
CGG
Pro
>WENV170126595
CENP01130530
401934
Cyanobacteriota
GGT
Thr
>WENV170124793
CENP01009108
480623
Cyanobacteriota
TCC
Gly
>WENV170126643
CENP01136130
73534
Cyanobacteriota
CAG
Leu
>WENV170126313
CENP01106269
30885
Cyanobacteriota
GGA
Ser
>WENV170126020
CENP01083683
118720
Cyanobacteriota
CAA
Leu
>WENV170126494
CENP01121994
118720
Cyanobacteriota
CAA
Leu
>WENV170126883
CENP01161767
400473
Cyanobacteriota
GAC
Val
>WENV170125614
CENP01057545
414584
Cyanobacteriota
GAC
Val
>WENV170127299
CENP01201327
29722
Cyanobacteriota
CGA
Ser
>WENV170125627
CENP01058399
29723
Cyanobacteriota
TGA
Ser
>WENV170126130
CENP01092804
16506
Cyanobacteriota
GCT
Ser
>WENV170126712
CENP01144566
400477
Cyanobacteriota
GTT
Asn
>WENV170124812
CENP01010416
178673
Cyanobacteriota
CCG
Arg
>WENV170126791
CENP01151210
185831
Cyanobacteriota
CAT
Met
>WENV170126265
CENP01102471
73307
Cyanobacteriota
CAG
Leu
>WENV170125767
CENP01066667
400471
Cyanobacteriota
TAC
Val
>WENV170125894
CENP01074443
185579
Cyanobacteriota
CAT
Met
>WENV170124887
CENP01013701
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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