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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170128515
CENQ01011330
30885
Cyanobacteriota
GGA
Ser
>WENV170129977
CENQ01142173
282452
Cyanobacteriota
GGC
Ala
>WENV170128893
CENQ01043511
400475
Cyanobacteriota
TGT
Thr
>WENV170129468
CENQ01098212
118720
Cyanobacteriota
CAA
Leu
>WENV170129062
CENQ01058592
30082
Cyanobacteriota
TGA
Ser
>WENV170128423
CENQ01003299
292138
Cyanobacteriota
CCA
Trp
>WENV170129348
CENQ01085370
292138
Cyanobacteriota
CCA
Trp
>WENV170128486
CENQ01008703
228486
Cyanobacteriota
GTC
Asp
>WENV170128821
CENQ01036739
401929
Cyanobacteriota
TTG
Gln
>WENV170129477
CENQ01099242
401929
Cyanobacteriota
TTG
Gln
>WENV170128466
CENQ01007107
343795
Cyanobacteriota
GGC
Ala
>WENV170128589
CENQ01017733
343795
Cyanobacteriota
GGC
Ala
>WENV170128641
CENQ01021275
343795
Cyanobacteriota
GGC
Ala
>WENV170128826
CENQ01037127
343795
Cyanobacteriota
GGC
Ala
>WENV170128927
CENQ01046182
343795
Cyanobacteriota
GGC
Ala
>WENV170129179
CENQ01069074
343795
Cyanobacteriota
GGC
Ala
>WENV170129315
CENQ01082483
343795
Cyanobacteriota
GGC
Ala
>WENV170129369
CENQ01087267
343795
Cyanobacteriota
GGC
Ala
>WENV170129414
CENQ01094047
343795
Cyanobacteriota
GGC
Ala
>WENV170129481
CENQ01099424
343795
Cyanobacteriota
GGC
Ala
>WENV170129514
CENQ01104309
343795
Cyanobacteriota
GGC
Ala
>WENV170129528
CENQ01106518
343795
Cyanobacteriota
GGC
Ala
>WENV170129572
CENQ01112094
343795
Cyanobacteriota
GGC
Ala
>WENV170129600
CENQ01114718
343795
Cyanobacteriota
GGC
Ala
>WENV170129671
CENQ01121273
343795
Cyanobacteriota
GGC
Ala
>WENV170129690
CENQ01122600
343795
Cyanobacteriota
GGC
Ala
>WENV170129693
CENQ01123037
343795
Cyanobacteriota
GGC
Ala
>WENV170129761
CENQ01129591
343795
Cyanobacteriota
GGC
Ala
>WENV170129828
CENQ01133933
343795
Cyanobacteriota
GGC
Ala
>WENV170129847
CENQ01135049
343795
Cyanobacteriota
GGC
Ala
>WENV170129971
CENQ01141801
343795
Cyanobacteriota
GGC
Ala
>WENV170130048
CENQ01143913
343795
Cyanobacteriota
GGC
Ala
>WENV170128620
CENQ01019474
46946
Cyanobacteriota
TAA
Leu
>WENV170129531
CENQ01106551
46946
Cyanobacteriota
TAA
Leu
>WENV170128674
CENQ01024009
283431
Cyanobacteriota
GTG
His
>WENV170130210
CENQ01232223
410287
Cyanobacteriota
CCC
Gly
>WENV170129097
CENQ01061874
118688
Cyanobacteriota
TAG
Leu
>WENV170129505
CENQ01102642
118688
Cyanobacteriota
TAG
Leu
>WENV170128451
CENQ01005083
177220
Cyanobacteriota
CAT
Met
>WENV170129292
CENQ01079939
177220
Cyanobacteriota
CAT
Met
>WENV170129536
CENQ01107737
177220
Cyanobacteriota
CAT
Met
>WENV170128514
CENQ01011285
219114
Cyanobacteriota
GGG
Pro
>WENV170129870
CENQ01136278
219114
Cyanobacteriota
GGG
Pro
>WENV170128424
CENQ01003299
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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