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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170133012
CENT01196033
299323
Cyanobacteriota
CAT
Met
>WENV170131808
CENT01008912
30885
Cyanobacteriota
GGA
Ser
>WENV170132005
CENT01026274
282452
Cyanobacteriota
GGC
Ala
>WENV170132208
CENT01047461
283430
Cyanobacteriota
CCA
Trp
>WENV170132236
CENT01050508
400473
Cyanobacteriota
GAC
Val
>WENV170132465
CENT01073466
228486
Cyanobacteriota
GTC
Asp
>WENV170132143
CENT01040912
343795
Cyanobacteriota
GGC
Ala
>WENV170131935
CENT01018547
16506
Cyanobacteriota
GCT
Ser
>WENV170132717
CENT01097469
410287
Cyanobacteriota
CCC
Gly
>WENV170132040
CENT01029646
400471
Cyanobacteriota
TAC
Val
>WENV170132425
CENT01070038
177076
Cyanobacteriota
GTC
Asp
>WENV170132938
CENT01177836
399503
Cyanobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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