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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170141268
CENX01172783
299323
Cyanobacteriota
CAT
Met
>WENV170139317
CENX01002598
118720
Cyanobacteriota
CAA
Leu
>WENV170140069
CENX01052619
285848
Cyanobacteriota
CAT
Met
>WENV170141506
CENX01195043
30082
Cyanobacteriota
TGA
Ser
>WENV170139877
CENX01039249
401929
Cyanobacteriota
TTG
Gln
>WENV170140872
CENX01128904
401929
Cyanobacteriota
TTG
Gln
>WENV170139743
CENX01030520
343795
Cyanobacteriota
GGC
Ala
>WENV170140040
CENX01050650
343795
Cyanobacteriota
GGC
Ala
>WENV170140413
CENX01084052
343795
Cyanobacteriota
GGC
Ala
>WENV170141265
CENX01172446
343795
Cyanobacteriota
GGC
Ala
>WENV170141497
CENX01194398
291400
Cyanobacteriota
GTG
His
>WENV170140575
CENX01098777
185187
Cyanobacteriota
CCG
Arg
>WENV170140576
CENX01098792
283431
Cyanobacteriota
GTG
His
>WENV170141529
CENX01196753
410287
Cyanobacteriota
CCC
Gly
>WENV170141135
CENX01156180
118688
Cyanobacteriota
TAG
Leu
>WENV170139960
CENX01044901
177220
Cyanobacteriota
CAT
Met
>WENV170139397
CENX01009325
185579
Cyanobacteriota
CAT
Met
>WENV170139499
CENX01014912
177076
Cyanobacteriota
GTC
Asp
>WENV170141087
CENX01150810
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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