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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170150184
CEOC01093745
401934
Cyanobacteriota
GGT
Thr
>WENV170150215
CEOC01096642
400475
Cyanobacteriota
TGT
Thr
>WENV170150353
CEOC01113872
118720
Cyanobacteriota
CAA
Leu
>WENV170151163
CEOC01234302
414584
Cyanobacteriota
GAC
Val
>WENV170149786
CEOC01055446
285848
Cyanobacteriota
CAT
Met
>WENV170149877
CEOC01063838
30082
Cyanobacteriota
TGA
Ser
>WENV170149251
CEOC01013039
180925
Cyanobacteriota
ACG
Arg
>WENV170149722
CEOC01051151
401929
Cyanobacteriota
TTG
Gln
>WENV170150830
CEOC01161417
46946
Cyanobacteriota
TAA
Leu
>WENV170149436
CEOC01028928
177109
Cyanobacteriota
CCT
Arg
>WENV170150664
CEOC01147733
283431
Cyanobacteriota
GTG
His
>WENV170151190
CEOC01248767
118688
Cyanobacteriota
TAG
Leu
>WENV170150410
CEOC01121873
178673
Cyanobacteriota
CCG
Arg
>WENV170151336
CEOC01304264
177220
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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