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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170877801
MDTC01065107
299323
Cyanobacteriota
CAT
Met
>WENV170874704
MDTC01009729
401934
Cyanobacteriota
GGT
Thr
>WENV170876127
MDTC01034966
401934
Cyanobacteriota
GGT
Thr
>WENV170885688
MDTC01207109
401934
Cyanobacteriota
GGT
Thr
>WENV170874247
MDTC01000439
326453
Cyanobacteriota
CGC
Ala
>WENV170875463
MDTC01022103
326453
Cyanobacteriota
CGC
Ala
>WENV170884680
MDTC01187608
195553
Cyanobacteriota
GGG
Pro
>WENV170874752
MDTC01010442
282452
Cyanobacteriota
GGC
Ala
>WENV170879225
MDTC01091305
282452
Cyanobacteriota
GGC
Ala
>WENV170881254
MDTC01127906
282452
Cyanobacteriota
GGC
Ala
>WENV170881485
MDTC01131801
282452
Cyanobacteriota
GGC
Ala
>WENV170883250
MDTC01162896
176188
Cyanobacteriota
CAT
Met
>WENV170880971
MDTC01123236
400473
Cyanobacteriota
GAC
Val
>WENV170875551
MDTC01023684
414584
Cyanobacteriota
GAC
Val
>WENV170878630
MDTC01080431
414584
Cyanobacteriota
GAC
Val
>WENV170880409
MDTC01112693
414584
Cyanobacteriota
GAC
Val
>WENV170881876
MDTC01138910
414584
Cyanobacteriota
GAC
Val
>WENV170883015
MDTC01158258
414584
Cyanobacteriota
GAC
Val
>WENV170883847
MDTC01173754
414584
Cyanobacteriota
GAC
Val
>WENV170886122
MDTC01214972
414584
Cyanobacteriota
GAC
Val
>WENV170887984
MDTC01249154
414584
Cyanobacteriota
GAC
Val
>WENV170880349
MDTC01111705
14711
Cyanobacteriota
GCT
Ser
>WENV170880696
MDTC01118624
14711
Cyanobacteriota
GCT
Ser
>WENV170886613
MDTC01224342
14711
Cyanobacteriota
GCT
Ser
>WENV170876970
MDTC01049629
212126
Cyanobacteriota
GTC
Asp
>WENV170884105
MDTC01177987
30082
Cyanobacteriota
TGA
Ser
>WENV170878674
MDTC01081284
30082
Cyanobacteriota
TGA
Ser
>WENV170884224
MDTC01180217
30082
Cyanobacteriota
TGA
Ser
>WENV170884499
MDTC01184352
30082
Cyanobacteriota
TGA
Ser
>WENV170875749
MDTC01028003
292138
Cyanobacteriota
CCA
Trp
>WENV170878702
MDTC01081739
292138
Cyanobacteriota
CCA
Trp
>WENV170882171
MDTC01144853
292138
Cyanobacteriota
CCA
Trp
>WENV170886155
MDTC01215700
292138
Cyanobacteriota
CCA
Trp
>WENV170880365
MDTC01111895
401929
Cyanobacteriota
TTG
Gln
>WENV170879683
MDTC01099319
291400
Cyanobacteriota
GTG
His
>WENV170874375
MDTC01003447
46946
Cyanobacteriota
TAA
Leu
>WENV170874480
MDTC01005441
283431
Cyanobacteriota
GTG
His
>WENV170880615
MDTC01117161
283431
Cyanobacteriota
GTG
His
>WENV170881148
MDTC01126117
283431
Cyanobacteriota
GTG
His
>WENV170888588
MDTC01260260
283431
Cyanobacteriota
GTG
His
>WENV170875183
MDTC01017309
400477
Cyanobacteriota
GTT
Asn
>WENV170876297
MDTC01037747
178673
Cyanobacteriota
CCG
Arg
>WENV170885137
MDTC01196531
178673
Cyanobacteriota
CCG
Arg
>WENV170887818
MDTC01246453
178673
Cyanobacteriota
CCG
Arg
>WENV170885429
MDTC01202028
185831
Cyanobacteriota
CAT
Met
>WENV170876046
MDTC01033914
73307
Cyanobacteriota
CAG
Leu
>WENV170886253
MDTC01217719
73307
Cyanobacteriota
CAG
Leu
>WENV170878569
MDTC01079271
177220
Cyanobacteriota
CAT
Met
>WENV170884853
MDTC01191315
177220
Cyanobacteriota
CAT
Met
>WENV170877574
MDTC01060618
219114
Cyanobacteriota
GGG
Pro
>WENV170885604
MDTC01205609
219114
Cyanobacteriota
GGG
Pro
>WENV170887918
MDTC01248269
219114
Cyanobacteriota
GGG
Pro
>WENV170889153
MDTC01270299
219114
Cyanobacteriota
GGG
Pro
>WENV170878703
MDTC01081739
177076
Cyanobacteriota
GTC
Asp
>WENV170882172
MDTC01144853
177076
Cyanobacteriota
GTC
Asp
>WENV170886156
MDTC01215700
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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