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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183698236
OZSS01000165
366531
Cyanobacteriota
TTG
Gln
>WENV183698591
OZSS01002139
366531
Cyanobacteriota
TTG
Gln
>WENV183700276
OZSS01152105
237009
Cyanobacteriota
GGC
Ala
>WENV183699721
OZSS01046135
267489
Cyanobacteriota
GGC
Ala
>WENV183698528
OZSS01001549
144929
Cyanobacteriota
CAT
Met
>WENV183699276
OZSS01018870
144929
Cyanobacteriota
CAT
Met
>WENV183700013
OZSS01082596
144929
Cyanobacteriota
CAT
Met
>WENV183698366
OZSS01000702
145761
Cyanobacteriota
GTC
Asp
>WENV183698940
OZSS01007573
145761
Cyanobacteriota
GTC
Asp
>WENV183700357
OZSS01200630
145761
Cyanobacteriota
GTC
Asp
>WENV183698196
OZSS01000091
164907
Cyanobacteriota
GGG
Pro
>WENV183698570
OZSS01001965
164907
Cyanobacteriota
GGG
Pro
>WENV183699077
OZSS01011533
164907
Cyanobacteriota
GGG
Pro
>WENV183699494
OZSS01028785
339686
Cyanobacteriota
TAC
Val
>WENV183698206
OZSS01000102
37357
Cyanobacteriota
TAA
Leu
>WENV183698262
OZSS01000254
96363
Cyanobacteriota
TAG
Leu
>WENV183698361
OZSS01000662
96363
Cyanobacteriota
TAG
Leu
>WENV183699666
OZSS01041999
25356
Cyanobacteriota
GGA
Ser
>WENV183698343
OZSS01000571
149253
Cyanobacteriota
ACG
Arg
>WENV183698219
OZSS01000136
149253
Cyanobacteriota
ACG
Arg
>WENV183699511
OZSS01029656
23668
Cyanobacteriota
TGA
Ser
>WENV183699445
OZSS01026385
363933
Cyanobacteriota
GTT
Asn
>WENV183698630
OZSS01002482
363933
Cyanobacteriota
GTT
Asn
>WENV183698220
OZSS01000137
363933
Cyanobacteriota
GTT
Asn
>WENV183699394
OZSS01023859
237899
Cyanobacteriota
CCA
Trp
>WENV183698215
OZSS01000126
23971
Cyanobacteriota
TGA
Ser
>WENV183698376
OZSS01000723
411836
Cyanobacteriota
TCC
Gly
>WENV183698291
OZSS01000325
411836
Cyanobacteriota
TCC
Gly
>WENV183699990
OZSS01078002
339688
Cyanobacteriota
GAC
Val
>WENV183698922
OZSS01007062
252089
Cyanobacteriota
GTG
His
>WENV183698531
OZSS01001593
252089
Cyanobacteriota
GTG
His
>WENV183699309
OZSS01020472
148812
Cyanobacteriota
CGG
Pro
>WENV183698638
OZSS01002538
190971
Cyanobacteriota
GTC
Asp
>WENV183698637
OZSS01002538
190971
Cyanobacteriota
GTC
Asp
>WENV183700157
OZSS01113825
80908
Cyanobacteriota
CAA
Leu
>WENV183699347
OZSS01021945
101255
Cyanobacteriota
TAG
Leu
>WENV183699609
OZSS01036423
11030
Cyanobacteriota
GCT
Ser
>WENV183698985
OZSS01008706
11030
Cyanobacteriota
GCT
Ser
>WENV183698313
OZSS01000428
11030
Cyanobacteriota
GCT
Ser
>WENV183698467
OZSS01001221
240100
Cyanobacteriota
CAT
Met
>WENV183698218
OZSS01000136
240100
Cyanobacteriota
CAT
Met
>WENV183698604
OZSS01002199
95762
Cyanobacteriota
AAG
Leu
>WENV183698155
OZSS01000016
95762
Cyanobacteriota
AAG
Leu
>WENV183698208
OZSS01000106
275577
Cyanobacteriota
TGC
Ala
>WENV183700326
OZSS01181752
188100
Cyanobacteriota
CCG
Arg
>WENV183698237
OZSS01000165
188100
Cyanobacteriota
CCG
Arg
>WENV183699883
OZSS01062631
341034
Cyanobacteriota
GGT
Thr
>WENV183699364
OZSS01022910
341034
Cyanobacteriota
GGT
Thr
>WENV183698620
OZSS01002394
341034
Cyanobacteriota
GGT
Thr
>WENV183698309
OZSS01000395
145893
Cyanobacteriota
CAT
Met
>WENV183700356
OZSS01200630
275071
Cyanobacteriota
CCA
Trp
>WENV183698977
OZSS01008375
275071
Cyanobacteriota
CCA
Trp
>WENV183698289
OZSS01000316
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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