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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181559405
OGIZ01001061
183771
Fusobacteriota
TCG
Arg
>WENV181559625
OGIZ01008842
141145
Fusobacteriota
>WENV181559421
OGIZ01001120
288879
Fusobacteriota
TAC
Val
>WENV181559660
OGIZ01013235
280538
Fusobacteriota
TTT
Lys
>WENV181559661
OGIZ01013235
143640
Fusobacteriota
TAG
Leu
>WENV181559534
OGIZ01002877
288877
Fusobacteriota
GTT
Asn
>WENV181559494
OGIZ01001965
464812
Fusobacteriota
TTG
Gln
>WENV181559502
OGIZ01002178
288878
Fusobacteriota
TGT
Thr
>WENV181559420
OGIZ01001116
183773
Fusobacteriota
CCT
Arg
>WENV181559407
OGIZ01001061
74687
Fusobacteriota
CAA
Leu
>WENV181559406
OGIZ01001061
183772
Fusobacteriota
ACG
Arg
>WENV181559658
OGIZ01013235
183768
Fusobacteriota
CAT
Met
>WENV181559626
OGIZ01008842
30524
Fusobacteriota
GCT
Ser
>WENV181559657
OGIZ01013235
57087
Fusobacteriota
TAA
Leu
>WENV181559544
OGIZ01003334
192090
Fusobacteriota
CAT
Met
>WENV181559543
OGIZ01003327
183766
Fusobacteriota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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