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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170153513
CEOF01101081
297858
Gammaproteobacteria
TGC
Ala
>WENV170153842
CEOF01140314
297858
Gammaproteobacteria
TGC
Ala
>WENV170154811
CEOF01252887
297858
Gammaproteobacteria
TGC
Ala
>WENV170152570
CEOF01012694
20664
Gammaproteobacteria
GCT
Ser
>WENV170154043
CEOF01164428
314350
Gammaproteobacteria
CCA
Trp
>WENV170154834
CEOF01277302
314350
Gammaproteobacteria
CCA
Trp
>WENV170152768
CEOF01028066
284022
Gammaproteobacteria
TGT
Thr
>WENV170152622
CEOF01016677
292194
Gammaproteobacteria
GGT
Thr
>WENV170153916
CEOF01149316
292194
Gammaproteobacteria
GGT
Thr
>WENV170154447
CEOF01202044
287057
Gammaproteobacteria
GAA
Phe
>WENV170154353
CEOF01195325
178025
Gammaproteobacteria
GAC
Val
>WENV170154889
CEOF01321205
178471
Gammaproteobacteria
GTT
Asn
>WENV170154995
CEOF01389920
292174
Gammaproteobacteria
GAA
Phe
>WENV170152418
CEOF01000723
208229
Gammaproteobacteria
TGG
Pro
>WENV170152899
CEOF01039661
208229
Gammaproteobacteria
TGG
Pro
>WENV170153754
CEOF01130000
319139
Gammaproteobacteria
GCC
Gly
>WENV170153600
CEOF01112024
177028
Gammaproteobacteria
CAT
Met
>WENV170152444
CEOF01003731
488965
Gammaproteobacteria
GCA
Cys
>WENV170154453
CEOF01202582
488965
Gammaproteobacteria
GCA
Cys
>WENV170154485
CEOF01204349
488965
Gammaproteobacteria
GCA
Cys
>WENV170154616
CEOF01211308
488965
Gammaproteobacteria
GCA
Cys
>WENV170154868
CEOF01306682
176544
Gammaproteobacteria
CAT
Met
>WENV170155024
CEOF01399815
180678
Gammaproteobacteria
CCG
Arg
>WENV170152596
CEOF01015492
282902
Gammaproteobacteria
TGT
Thr
>WENV170152771
CEOF01028066
285826
Gammaproteobacteria
GGT
Thr
>WENV170153514
CEOF01101213
180679
Gammaproteobacteria
CCA
Trp
>WENV170152507
CEOF01008775
283486
Gammaproteobacteria
TGT
Thr
>WENV170154458
CEOF01202885
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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