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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170158735
CEOK01015683
480941
Gammaproteobacteria
TCC
Gly
>WENV170159869
CEOK01098262
209464
Gammaproteobacteria
CCG
Arg
>WENV170158520
CEOK01003575
314350
Gammaproteobacteria
CCA
Trp
>WENV170158668
CEOK01012408
314350
Gammaproteobacteria
CCA
Trp
>WENV170159063
CEOK01037794
178025
Gammaproteobacteria
GAC
Val
>WENV170159690
CEOK01082961
351236
Gammaproteobacteria
TTT
Lys
>WENV170159691
CEOK01082961
351236
Gammaproteobacteria
TTT
Lys
>WENV170160398
CEOK01140705
350703
Gammaproteobacteria
TTT
Lys
>WENV170161606
CEOK01369845
307269
Gammaproteobacteria
TTC
Glu
>WENV170159785
CEOK01090714
334421
Gammaproteobacteria
TGT
Thr
>WENV170159299
CEOK01054749
488965
Gammaproteobacteria
GCA
Cys
>WENV170160704
CEOK01170376
488965
Gammaproteobacteria
GCA
Cys
>WENV170160713
CEOK01170766
488965
Gammaproteobacteria
GCA
Cys
>WENV170159921
CEOK01102128
296672
Gammaproteobacteria
GGT
Thr
>WENV170159919
CEOK01102128
141076
Gammaproteobacteria
GTA
Tyr
>WENV170159826
CEOK01094213
186591
Gammaproteobacteria
ACG
Arg
>WENV170160754
CEOK01173846
186591
Gammaproteobacteria
ACG
Arg
>WENV170159500
CEOK01068477
282902
Gammaproteobacteria
TGT
Thr
>WENV170159659
CEOK01080956
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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