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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170169782
CEOP01237001
284706
Gammaproteobacteria
GTT
Asn
>WENV170167928
CEOP01048132
292194
Gammaproteobacteria
GGT
Thr
>WENV170169909
CEOP01245438
185999
Gammaproteobacteria
CCG
Arg
>WENV170168808
CEOP01123705
292006
Gammaproteobacteria
TGC
Ala
>WENV170170179
CEOP01386389
176545
Gammaproteobacteria
CAT
Met
>WENV170170342
CEOP01454450
74048
Gammaproteobacteria
CAA
Leu
>WENV170168717
CEOP01116305
176301
Gammaproteobacteria
GAT
Ile
>WENV170168807
CEOP01123705
176301
Gammaproteobacteria
GAT
Ile
>WENV170169427
CEOP01202335
176301
Gammaproteobacteria
GAT
Ile
>WENV170167922
CEOP01047971
285547
Gammaproteobacteria
TTG
Gln
>WENV170168900
CEOP01136529
282902
Gammaproteobacteria
TGT
Thr
>WENV170168580
CEOP01104659
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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