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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192371
CEPE01106357
73123
Gammaproteobacteria
CAA
Leu
>WENV170192422
CEPE01119845
281275
Gammaproteobacteria
TGT
Thr
>WENV170192194
CEPE01023761
178175
Gammaproteobacteria
ACG
Arg
>WENV170192370
CEPE01106290
29834
Gammaproteobacteria
GCT
Ser
>WENV170192199
CEPE01028954
218635
Gammaproteobacteria
GAC
Val
>WENV170192246
CEPE01052133
197551
Gammaproteobacteria
TCT
Arg
>WENV170192381
CEPE01110638
281282
Gammaproteobacteria
TTC
Glu
>WENV170192149
CEPE01004970
329164
Gammaproteobacteria
TTT
Lys
>WENV170192437
CEPE01123563
176663
Gammaproteobacteria
GGG
Pro
>WENV170192192
CEPE01023113
176664
Gammaproteobacteria
CCT
Arg
>WENV170192241
CEPE01050740
186418
Gammaproteobacteria
GTC
Asp
>WENV170192262
CEPE01060893
176478
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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