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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192781
CEPG01009463
283283
Gammaproteobacteria
TAC
Val
>WENV170192824
CEPG01017166
197551
Gammaproteobacteria
TCT
Arg
>WENV170192726
CEPG01000792
282550
Gammaproteobacteria
TAC
Val
>WENV170192777
CEPG01009030
74339
Gammaproteobacteria
GAG
Leu
>WENV170192835
CEPG01018150
292006
Gammaproteobacteria
TGC
Ala
>WENV170192982
CEPG01042195
480516
Gammaproteobacteria
GCA
Cys
>WENV170192976
CEPG01040938
319139
Gammaproteobacteria
GCC
Gly
>WENV170192756
CEPG01006192
371341
Gammaproteobacteria
GTT
Asn
>WENV170192932
CEPG01033619
371341
Gammaproteobacteria
GTT
Asn
>WENV170192757
CEPG01006567
401830
Gammaproteobacteria
TTG
Gln
>WENV170192819
CEPG01016636
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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