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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730866
PJTS01001541
411593
Gammaproteobacteria
CCC
Gly
>WENV183730684
PJTS01000329
23711
Gammaproteobacteria
GGA
Ser
>WENV183730654
PJTS01000266
23626
Gammaproteobacteria
TGA
Ser
>WENV183730463
PJTS01000037
65387
Gammaproteobacteria
CAG
Leu
>WENV183730464
PJTS01000037
65387
Gammaproteobacteria
CAG
Leu
>WENV183730465
PJTS01000037
65387
Gammaproteobacteria
CAG
Leu
>WENV183731134
PJTS01012226
412119
Gammaproteobacteria
CTG
Gln
>WENV183730805
PJTS01000883
6885
Gammaproteobacteria
GCT
Ser
>WENV183730982
PJTS01003123
6885
Gammaproteobacteria
GCT
Ser
>WENV183730736
PJTS01000449
412505
Gammaproteobacteria
GCA
Cys
>WENV183730595
PJTS01000164
412505
Gammaproteobacteria
GCA
Cys
>WENV183730937
PJTS01002268
238674
Gammaproteobacteria
TGT
Thr
>WENV183730926
PJTS01002132
238674
Gammaproteobacteria
TGT
Thr
>WENV183730410
PJTS01000008
51143
Gammaproteobacteria
TGA
Ser
>WENV183730552
PJTS01000127
16446
Gammaproteobacteria
GCT
Ser
>WENV183730467
PJTS01000038
279806
Gammaproteobacteria
TGT
Thr
>WENV183730886
PJTS01001732
52727
Gammaproteobacteria
GGA
Ser
>WENV183730628
PJTS01000221
52727
Gammaproteobacteria
GGA
Ser
>WENV183731048
PJTS01005599
3850
Gammaproteobacteria
>WENV183730466
PJTS01000038
238307
Gammaproteobacteria
GAA
Phe
>WENV183730760
PJTS01000595
96066
Gammaproteobacteria
TAA
Leu
>WENV183731393
PJTS01052837
279906
Gammaproteobacteria
TGC
Ala
>WENV183731288
PJTS01033018
279906
Gammaproteobacteria
TGC
Ala
>WENV183731276
PJTS01031062
279906
Gammaproteobacteria
TGC
Ala
>WENV183730474
PJTS01000044
161470
Gammaproteobacteria
TCT
Arg
>WENV183731086
PJTS01008540
68265
Gammaproteobacteria
GAG
Leu
>WENV183730842
PJTS01001276
68265
Gammaproteobacteria
GAG
Leu
>WENV183730554
PJTS01000127
165964
Gammaproteobacteria
ACG
Arg
>WENV183730556
PJTS01000127
147595
Gammaproteobacteria
CCT
Arg
>WENV183730932
PJTS01002198
16238
Gammaproteobacteria
CGA
Ser
>WENV183730920
PJTS01002061
16238
Gammaproteobacteria
CGA
Ser
>WENV183730468
PJTS01000038
145334
Gammaproteobacteria
CCG
Arg
>WENV183730425
PJTS01000013
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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