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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183753848
PPYE01073166
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183756075
PPYE01122441
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183759019
PPYE01202040
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183760187
PPYE01225140
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183760916
PPYE01244821
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183765241
PPYE01335569
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183766275
PPYE01349553
144620
Thermodesulfobacteriota
GGG
Pro
>WENV183753888
PPYE01073933
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183760652
PPYE01234216
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183765095
PPYE01326867
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183766290
PPYE01350288
151846
Thermodesulfobacteriota
CCA
Trp
>WENV183764202
PPYE01319214
345151
Thermodesulfobacteriota
CCC
Gly
>WENV183753903
PPYE01074179
242869
Thermodesulfobacteriota
GTT
Asn
>WENV183753928
PPYE01075171
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183755709
PPYE01111181
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183756962
PPYE01139565
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183758808
PPYE01190428
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183759880
PPYE01213771
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183760647
PPYE01234186
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183765083
PPYE01326354
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183766272
PPYE01349499
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183767259
PPYE01363573
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183768407
PPYE01387473
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183769593
PPYE01419695
151849
Thermodesulfobacteriota
GAT
Ile
>WENV183760160
PPYE01223809
315876
Thermodesulfobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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