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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170071340
CDZQ01053898
204388
Verrucomicrobiota
CAT
Met
>WENV170070033
CDZQ01011822
406043
Verrucomicrobiota
GCA
Cys
>WENV170070527
CDZQ01028462
293125
Verrucomicrobiota
GAA
Phe
>WENV170070035
CDZQ01011822
406350
Verrucomicrobiota
TGT
Thr
>WENV170069720
CDZQ01001404
148006
Verrucomicrobiota
CAA
Leu
>WENV170070032
CDZQ01011822
101600
Verrucomicrobiota
AAG
Leu
>WENV170069677
CDZQ01000400
293105
Verrucomicrobiota
CAT
Met
>WENV170069674
CDZQ01000400
405901
Verrucomicrobiota
GCC
Gly
>WENV170071317
CDZQ01053074
405901
Verrucomicrobiota
GCC
Gly
>WENV170070886
CDZQ01039270
483642
Verrucomicrobiota
CCC
Gly
>WENV170070801
CDZQ01036050
8960
Verrucomicrobiota
CGA
Ser
>WENV170069723
CDZQ01001404
101463
Verrucomicrobiota
TAA
Leu
>WENV170069821
CDZQ01004185
157427
Verrucomicrobiota
GTC
Asp
>WENV170070948
CDZQ01041173
157427
Verrucomicrobiota
GTC
Asp
>WENV170070036
CDZQ01011822
293079
Verrucomicrobiota
CGC
Ala
>WENV170069721
CDZQ01001404
120352
Verrucomicrobiota
TAG
Leu
>WENV170069724
CDZQ01001404
292636
Verrucomicrobiota
>WENV170070885
CDZQ01039270
489412
Verrucomicrobiota
TCC
Gly
>WENV170069675
CDZQ01000400
298263
Verrucomicrobiota
TTC
Glu
>WENV170070034
CDZQ01011822
298263
Verrucomicrobiota
TTC
Glu
>WENV170069997
CDZQ01009632
293069
Verrucomicrobiota
CTT
Lys
>WENV170069998
CDZQ01009632
293069
Verrucomicrobiota
CTT
Lys
>WENV170069722
CDZQ01001404
406336
Verrucomicrobiota
CCT
Arg
>WENV170070800
CDZQ01036050
406369
Verrucomicrobiota
CCG
Arg
>WENV170070993
CDZQ01043257
405940
Verrucomicrobiota
GGT
Thr
>WENV170071557
CDZQ01060713
405940
Verrucomicrobiota
GGT
Thr
>WENV170069819
CDZQ01004185
406044
Verrucomicrobiota
CTG
Gln
>WENV170070529
CDZQ01028462
187556
Verrucomicrobiota
GGG
Pro
>WENV170069676
CDZQ01000400
406037
Verrucomicrobiota
GTG
His
>WENV170069820
CDZQ01004185
406360
Verrucomicrobiota
GAC
Val
>WENV170070947
CDZQ01041173
187548
Verrucomicrobiota
TCT
Arg
>WENV170069996
CDZQ01009632
406040
Verrucomicrobiota
CGT
Thr
>WENV170069673
CDZQ01000400
57652
Verrucomicrobiota
TGA
Ser
>WENV170071316
CDZQ01053074
406039
Verrucomicrobiota
CAC
Val
>WENV170070191
CDZQ01016980
75458
Verrucomicrobiota
CAG
Leu
>WENV170071318
CDZQ01053074
406368
Verrucomicrobiota
TTG
Gln
>WENV170071339
CDZQ01053898
21159
Verrucomicrobiota
GGA
Ser
>WENV170071338
CDZQ01053898
101461
Verrucomicrobiota
GTA
Tyr
>WENV170070946
CDZQ01041173
293095
Verrucomicrobiota
TTT
Lys
>WENV170069818
CDZQ01004184
187561
Verrucomicrobiota
CGG
Pro
>WENV170071213
CDZQ01049317
187561
Verrucomicrobiota
CGG
Pro
>WENV170069672
CDZQ01000400
406342
Verrucomicrobiota
CAT
Met
>WENV170071337
CDZQ01053898
406351
Verrucomicrobiota
GTT
Asn
>WENV170071315
CDZQ01053074
303305
Verrucomicrobiota
GGC
Ala
>WENV170071053
CDZQ01044693
406346
Verrucomicrobiota
TAC
Val
>WENV170069725
CDZQ01001404
8938
Verrucomicrobiota
GCT
Ser
>WENV170070528
CDZQ01028462
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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