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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170085066
CEAB01038275
406350
Verrucomicrobiota
TGT
Thr
>WENV170084047
CEAB01000732
148006
Verrucomicrobiota
CAA
Leu
>WENV170084242
CEAB01008185
101600
Verrucomicrobiota
AAG
Leu
>WENV170085357
CEAB01047420
483642
Verrucomicrobiota
CCC
Gly
>WENV170084719
CEAB01026489
8960
Verrucomicrobiota
CGA
Ser
>WENV170084585
CEAB01021528
293079
Verrucomicrobiota
CGC
Ala
>WENV170085837
CEAB01065523
292636
Verrucomicrobiota
>WENV170085358
CEAB01047420
489412
Verrucomicrobiota
TCC
Gly
>WENV170085984
CEAB01070849
406336
Verrucomicrobiota
CCT
Arg
>WENV170085420
CEAB01049657
406369
Verrucomicrobiota
CCG
Arg
>WENV170086128
CEAB01074843
406044
Verrucomicrobiota
CTG
Gln
>WENV170084860
CEAB01031911
187556
Verrucomicrobiota
GGG
Pro
>WENV170085260
CEAB01044134
406360
Verrucomicrobiota
GAC
Val
>WENV170084057
CEAB01001060
57652
Verrucomicrobiota
TGA
Ser
>WENV170084257
CEAB01008678
406039
Verrucomicrobiota
CAC
Val
>WENV170085481
CEAB01051032
75458
Verrucomicrobiota
CAG
Leu
>WENV170085367
CEAB01047747
406368
Verrucomicrobiota
TTG
Gln
>WENV170084904
CEAB01033651
21159
Verrucomicrobiota
GGA
Ser
>WENV170084565
CEAB01020933
101461
Verrucomicrobiota
GTA
Tyr
>WENV170084772
CEAB01028411
293095
Verrucomicrobiota
TTT
Lys
>WENV170085852
CEAB01066457
406351
Verrucomicrobiota
GTT
Asn
>WENV170084202
CEAB01006836
303305
Verrucomicrobiota
GGC
Ala
>WENV170084849
CEAB01031265
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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