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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109393
CECA01076353
406043
Verrucomicrobiota
GCA
Cys
>WENV170107988
CECA01003623
293125
Verrucomicrobiota
GAA
Phe
>WENV170109217
CECA01069737
406350
Verrucomicrobiota
TGT
Thr
>WENV170108277
CECA01021402
148006
Verrucomicrobiota
CAA
Leu
>WENV170108721
CECA01043306
101600
Verrucomicrobiota
AAG
Leu
>WENV170107945
CECA01001139
293105
Verrucomicrobiota
CAT
Met
>WENV170108247
CECA01019704
405901
Verrucomicrobiota
GCC
Gly
>WENV170109068
CECA01060220
405901
Verrucomicrobiota
GCC
Gly
>WENV170108512
CECA01033147
483642
Verrucomicrobiota
CCC
Gly
>WENV170108942
CECA01054563
229220
Verrucomicrobiota
CAT
Met
>WENV170108401
CECA01028636
8960
Verrucomicrobiota
CGA
Ser
>WENV170108755
CECA01045162
101463
Verrucomicrobiota
TAA
Leu
>WENV170108068
CECA01009348
157427
Verrucomicrobiota
GTC
Asp
>WENV170108559
CECA01036240
157427
Verrucomicrobiota
GTC
Asp
>WENV170108702
CECA01042298
157427
Verrucomicrobiota
GTC
Asp
>WENV170109218
CECA01069737
293079
Verrucomicrobiota
CGC
Ala
>WENV170108723
CECA01043307
120352
Verrucomicrobiota
TAG
Leu
>WENV170108756
CECA01045162
292636
Verrucomicrobiota
>WENV170109394
CECA01076353
298263
Verrucomicrobiota
TTC
Glu
>WENV170108248
CECA01019704
298263
Verrucomicrobiota
TTC
Glu
>WENV170108009
CECA01004821
293069
Verrucomicrobiota
CTT
Lys
>WENV170108010
CECA01004821
293069
Verrucomicrobiota
CTT
Lys
>WENV170108011
CECA01004821
293069
Verrucomicrobiota
CTT
Lys
>WENV170108012
CECA01004821
293069
Verrucomicrobiota
CTT
Lys
>WENV170108722
CECA01043307
406336
Verrucomicrobiota
CCT
Arg
>WENV170108513
CECA01033147
406369
Verrucomicrobiota
CCG
Arg
>WENV170108146
CECA01014226
405940
Verrucomicrobiota
GGT
Thr
>WENV170108066
CECA01009348
406044
Verrucomicrobiota
CTG
Gln
>WENV170108869
CECA01050716
187556
Verrucomicrobiota
GGG
Pro
>WENV170107944
CECA01001139
406037
Verrucomicrobiota
GTG
His
>WENV170108067
CECA01009348
406360
Verrucomicrobiota
GAC
Val
>WENV170108036
CECA01006496
187548
Verrucomicrobiota
TCT
Arg
>WENV170108008
CECA01004821
406040
Verrucomicrobiota
CGT
Thr
>WENV170108246
CECA01019704
57652
Verrucomicrobiota
TGA
Ser
>WENV170108705
CECA01042734
406039
Verrucomicrobiota
CAC
Val
>WENV170109348
CECA01074576
75458
Verrucomicrobiota
CAG
Leu
>WENV170108886
CECA01051446
406368
Verrucomicrobiota
TTG
Gln
>WENV170108375
CECA01026930
21159
Verrucomicrobiota
GGA
Ser
>WENV170108990
CECA01056297
101461
Verrucomicrobiota
GTA
Tyr
>WENV170108560
CECA01036240
293095
Verrucomicrobiota
TTT
Lys
>WENV170108005
CECA01004821
187561
Verrucomicrobiota
CGG
Pro
>WENV170108249
CECA01019704
406342
Verrucomicrobiota
CAT
Met
>WENV170108989
CECA01056297
406351
Verrucomicrobiota
GTT
Asn
>WENV170108704
CECA01042734
303305
Verrucomicrobiota
GGC
Ala
>WENV170108514
CECA01033147
507474
Verrucomicrobiota
TCC
Gly
>WENV170109331
CECA01073498
406346
Verrucomicrobiota
TAC
Val
>WENV170108757
CECA01045162
8938
Verrucomicrobiota
GCT
Ser
>WENV170107989
CECA01003623
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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