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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109459
CECB01001203
406043
Verrucomicrobiota
GCA
Cys
>WENV170109835
CECB01008091
293125
Verrucomicrobiota
GAA
Phe
>WENV170109561
CECB01003069
406350
Verrucomicrobiota
TGT
Thr
>WENV170109653
CECB01004694
148006
Verrucomicrobiota
CAA
Leu
>WENV170109567
CECB01003257
293105
Verrucomicrobiota
CAT
Met
>WENV170109433
CECB01000837
405901
Verrucomicrobiota
GCC
Gly
>WENV170109723
CECB01005812
405901
Verrucomicrobiota
GCC
Gly
>WENV170109838
CECB01008091
483642
Verrucomicrobiota
CCC
Gly
>WENV170109537
CECB01002737
229220
Verrucomicrobiota
CAT
Met
>WENV170109707
CECB01005562
157427
Verrucomicrobiota
GTC
Asp
>WENV170109814
CECB01007718
157427
Verrucomicrobiota
GTC
Asp
>WENV170109562
CECB01003069
293079
Verrucomicrobiota
CGC
Ala
>WENV170109654
CECB01004694
120352
Verrucomicrobiota
TAG
Leu
>WENV170109834
CECB01008091
489412
Verrucomicrobiota
TCC
Gly
>WENV170109575
CECB01003262
293069
Verrucomicrobiota
CTT
Lys
>WENV170109576
CECB01003262
293069
Verrucomicrobiota
CTT
Lys
>WENV170109577
CECB01003262
293069
Verrucomicrobiota
CTT
Lys
>WENV170109652
CECB01004694
406336
Verrucomicrobiota
CCT
Arg
>WENV170109839
CECB01008091
406369
Verrucomicrobiota
CCG
Arg
>WENV170109831
CECB01008034
405940
Verrucomicrobiota
GGT
Thr
>WENV170109786
CECB01006981
406044
Verrucomicrobiota
CTG
Gln
>WENV170109837
CECB01008091
187556
Verrucomicrobiota
GGG
Pro
>WENV170109426
CECB01000569
406037
Verrucomicrobiota
GTG
His
>WENV170109815
CECB01007719
406360
Verrucomicrobiota
GAC
Val
>WENV170109511
CECB01002345
187548
Verrucomicrobiota
TCT
Arg
>WENV170109574
CECB01003262
406040
Verrucomicrobiota
CGT
Thr
>WENV170109816
CECB01007719
57652
Verrucomicrobiota
TGA
Ser
>WENV170109706
CECB01005561
406039
Verrucomicrobiota
CAC
Val
>WENV170109631
CECB01004234
406368
Verrucomicrobiota
TTG
Gln
>WENV170109479
CECB01001719
101461
Verrucomicrobiota
GTA
Tyr
>WENV170109510
CECB01002345
293095
Verrucomicrobiota
TTT
Lys
>WENV170109573
CECB01003262
187561
Verrucomicrobiota
CGG
Pro
>WENV170109722
CECB01005812
406342
Verrucomicrobiota
CAT
Met
>WENV170109478
CECB01001719
406351
Verrucomicrobiota
GTT
Asn
>WENV170109630
CECB01004234
303305
Verrucomicrobiota
GGC
Ala
>WENV170109813
CECB01007664
8938
Verrucomicrobiota
GCT
Ser
>WENV170109836
CECB01008091
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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