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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109887
CECF01001624
406043
Verrucomicrobiota
GCA
Cys
>WENV170111042
CECF01056673
293125
Verrucomicrobiota
GAA
Phe
>WENV170109889
CECF01001624
406350
Verrucomicrobiota
TGT
Thr
>WENV170110500
CECF01030950
148006
Verrucomicrobiota
CAA
Leu
>WENV170110788
CECF01044569
101600
Verrucomicrobiota
AAG
Leu
>WENV170109865
CECF01000559
293105
Verrucomicrobiota
CAT
Met
>WENV170109862
CECF01000559
405901
Verrucomicrobiota
GCC
Gly
>WENV170110586
CECF01034746
405901
Verrucomicrobiota
GCC
Gly
>WENV170109936
CECF01003891
483642
Verrucomicrobiota
CCC
Gly
>WENV170110337
CECF01022285
229220
Verrucomicrobiota
CAT
Met
>WENV170111266
CECF01067922
8960
Verrucomicrobiota
CGA
Ser
>WENV170110707
CECF01040691
101463
Verrucomicrobiota
TAA
Leu
>WENV170111222
CECF01066236
157427
Verrucomicrobiota
GTC
Asp
>WENV170111242
CECF01066820
157427
Verrucomicrobiota
GTC
Asp
>WENV170111295
CECF01069508
293079
Verrucomicrobiota
CGC
Ala
>WENV170110058
CECF01008737
120352
Verrucomicrobiota
TAG
Leu
>WENV170110708
CECF01040691
292636
Verrucomicrobiota
>WENV170109938
CECF01003891
489412
Verrucomicrobiota
TCC
Gly
>WENV170109863
CECF01000559
298263
Verrucomicrobiota
TTC
Glu
>WENV170109888
CECF01001624
298263
Verrucomicrobiota
TTC
Glu
>WENV170109848
CECF01000021
293069
Verrucomicrobiota
CTT
Lys
>WENV170109849
CECF01000021
293069
Verrucomicrobiota
CTT
Lys
>WENV170109850
CECF01000021
293069
Verrucomicrobiota
CTT
Lys
>WENV170111005
CECF01055019
293069
Verrucomicrobiota
CTT
Lys
>WENV170111006
CECF01055019
293069
Verrucomicrobiota
CTT
Lys
>WENV170111007
CECF01055019
293069
Verrucomicrobiota
CTT
Lys
>WENV170110059
CECF01008737
406336
Verrucomicrobiota
CCT
Arg
>WENV170109937
CECF01003891
406369
Verrucomicrobiota
CCG
Arg
>WENV170110873
CECF01048955
405940
Verrucomicrobiota
GGT
Thr
>WENV170111241
CECF01066820
406044
Verrucomicrobiota
CTG
Gln
>WENV170111202
CECF01065075
187556
Verrucomicrobiota
GGG
Pro
>WENV170109864
CECF01000559
406037
Verrucomicrobiota
GTG
His
>WENV170111025
CECF01056065
406360
Verrucomicrobiota
GAC
Val
>WENV170110162
CECF01013111
187548
Verrucomicrobiota
TCT
Arg
>WENV170109847
CECF01000021
406040
Verrucomicrobiota
CGT
Thr
>WENV170111004
CECF01055019
406040
Verrucomicrobiota
CGT
Thr
>WENV170110342
CECF01022738
57652
Verrucomicrobiota
TGA
Ser
>WENV170110785
CECF01044561
406039
Verrucomicrobiota
CAC
Val
>WENV170110099
CECF01010411
75458
Verrucomicrobiota
CAG
Leu
>WENV170110566
CECF01033603
406368
Verrucomicrobiota
TTG
Gln
>WENV170110618
CECF01036454
21159
Verrucomicrobiota
GGA
Ser
>WENV170110766
CECF01043400
101461
Verrucomicrobiota
GTA
Tyr
>WENV170111221
CECF01066236
293095
Verrucomicrobiota
TTT
Lys
>WENV170109844
CECF01000021
187561
Verrucomicrobiota
CGG
Pro
>WENV170111003
CECF01055019
187561
Verrucomicrobiota
CGG
Pro
>WENV170110343
CECF01022738
406342
Verrucomicrobiota
CAT
Met
>WENV170110776
CECF01044020
406351
Verrucomicrobiota
GTT
Asn
>WENV170110565
CECF01033603
303305
Verrucomicrobiota
GGC
Ala
>WENV170110862
CECF01048369
406346
Verrucomicrobiota
TAC
Val
>WENV170110709
CECF01040691
8938
Verrucomicrobiota
GCT
Ser
>WENV170111043
CECF01056673
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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