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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181897369
OGXT01000101
119661
Verrucomicrobiota
CAA
Leu
>WENV181897565
OGXT01000372
155256
Verrucomicrobiota
TCT
Arg
>WENV181897537
OGXT01000328
246701
Verrucomicrobiota
TTT
Lys
>WENV181898327
OGXT01003809
345141
Verrucomicrobiota
TTG
Gln
>WENV181897660
OGXT01000546
345133
Verrucomicrobiota
GAC
Val
>WENV181897270
OGXT01000036
82054
Verrucomicrobiota
GTA
Tyr
>WENV181897695
OGXT01000623
246677
Verrucomicrobiota
CTT
Lys
>WENV181897694
OGXT01000623
246677
Verrucomicrobiota
CTT
Lys
>WENV181897729
OGXT01000675
155264
Verrucomicrobiota
GGG
Pro
>WENV181897357
OGXT01000090
344845
Verrucomicrobiota
CTG
Gln
>WENV181897784
OGXT01000838
128202
Verrucomicrobiota
GTC
Asp
>WENV181897356
OGXT01000090
128202
Verrucomicrobiota
GTC
Asp
>WENV181897274
OGXT01000037
414625
Verrucomicrobiota
CCC
Gly
>WENV181897471
OGXT01000244
46246
Verrucomicrobiota
TGA
Ser
>WENV181897781
OGXT01000831
97755
Verrucomicrobiota
TAG
Leu
>WENV181897377
OGXT01000104
246700
Verrucomicrobiota
TTC
Glu
>WENV181897372
OGXT01000104
246700
Verrucomicrobiota
TTC
Glu
>WENV181897545
OGXT01000346
246687
Verrucomicrobiota
CGC
Ala
>WENV181897256
OGXT01000026
344841
Verrucomicrobiota
CAC
Val
>WENV181897417
OGXT01000164
60880
Verrucomicrobiota
CAG
Leu
>WENV181897365
OGXT01000101
82056
Verrucomicrobiota
TAA
Leu
>WENV181897693
OGXT01000623
344842
Verrucomicrobiota
CGT
Thr
>WENV181897568
OGXT01000377
170105
Verrucomicrobiota
CAT
Met
>WENV181897544
OGXT01000346
345123
Verrucomicrobiota
TGT
Thr
>WENV181897217
OGXT01000002
345110
Verrucomicrobiota
CCT
Arg
>WENV181897216
OGXT01000002
345110
Verrucomicrobiota
CCT
Arg
>WENV181897373
OGXT01000104
344839
Verrucomicrobiota
GTG
His
>WENV181898106
OGXT01002084
7274
Verrucomicrobiota
CGA
Ser
>WENV181897366
OGXT01000101
246260
Verrucomicrobiota
>WENV181897696
OGXT01000623
155268
Verrucomicrobiota
CGG
Pro
>WENV181897272
OGXT01000037
246728
Verrucomicrobiota
GAA
Phe
>WENV181897367
OGXT01000101
7256
Verrucomicrobiota
GCT
Ser
>WENV181897363
OGXT01000099
345115
Verrucomicrobiota
CAT
Met
>WENV181897780
OGXT01000828
345119
Verrucomicrobiota
TAC
Val
>WENV181897935
OGXT01001311
345124
Verrucomicrobiota
GTT
Asn
>WENV181898348
OGXT01004053
368497
Verrucomicrobiota
GCC
Gly
>WENV181897275
OGXT01000037
345142
Verrucomicrobiota
CCG
Arg
>WENV181897374
OGXT01000104
246709
Verrucomicrobiota
CAT
Met
>WENV181897273
OGXT01000037
154693
Verrucomicrobiota
TGG
Pro
>WENV181897625
OGXT01000456
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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