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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182129415
OHJZ01005393
406350
Verrucomicrobiota
TGT
Thr
>WENV182129455
OHJZ01006823
293105
Verrucomicrobiota
CAT
Met
>WENV182129531
OHJZ01012621
405901
Verrucomicrobiota
GCC
Gly
>WENV182129513
OHJZ01010439
483642
Verrucomicrobiota
CCC
Gly
>WENV182129651
OHJZ01034694
229220
Verrucomicrobiota
CAT
Met
>WENV182129519
OHJZ01012294
157427
Verrucomicrobiota
GTC
Asp
>WENV182129569
OHJZ01016257
293079
Verrucomicrobiota
CGC
Ala
>WENV182129461
OHJZ01006983
120352
Verrucomicrobiota
TAG
Leu
>WENV182129532
OHJZ01012681
292636
Verrucomicrobiota
>WENV182129436
OHJZ01006124
406336
Verrucomicrobiota
CCT
Arg
>WENV182129538
OHJZ01013515
405940
Verrucomicrobiota
GGT
Thr
>WENV182129539
OHJZ01013538
187556
Verrucomicrobiota
GGG
Pro
>WENV182129611
OHJZ01025221
406037
Verrucomicrobiota
GTG
His
>WENV182129593
OHJZ01019864
406360
Verrucomicrobiota
GAC
Val
>WENV182129474
OHJZ01007995
187548
Verrucomicrobiota
TCT
Arg
>WENV182129493
OHJZ01009112
57652
Verrucomicrobiota
TGA
Ser
>WENV182129489
OHJZ01008878
406039
Verrucomicrobiota
CAC
Val
>WENV182129382
OHJZ01004361
75458
Verrucomicrobiota
CAG
Leu
>WENV182129345
OHJZ01003258
21159
Verrucomicrobiota
GGA
Ser
>WENV182129296
OHJZ01002416
101461
Verrucomicrobiota
GTA
Tyr
>WENV182129419
OHJZ01005604
293095
Verrucomicrobiota
TTT
Lys
>WENV182129315
OHJZ01002592
187561
Verrucomicrobiota
CGG
Pro
>WENV182129350
OHJZ01003365
406342
Verrucomicrobiota
CAT
Met
>WENV182129421
OHJZ01005726
406351
Verrucomicrobiota
GTT
Asn
>WENV182129572
OHJZ01016619
303305
Verrucomicrobiota
GGC
Ala
>WENV182129512
OHJZ01010439
507474
Verrucomicrobiota
TCC
Gly
>WENV182129515
OHJZ01010538
406346
Verrucomicrobiota
TAC
Val
>WENV182129537
OHJZ01013372
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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