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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183722902
PDYJ01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV183722889
PDYJ01000001
155256
Verrucomicrobiota
TCT
Arg
>WENV183722888
PDYJ01000001
246701
Verrucomicrobiota
TTT
Lys
>WENV183722873
PDYJ01000001
345141
Verrucomicrobiota
TTG
Gln
>WENV183722875
PDYJ01000001
345133
Verrucomicrobiota
GAC
Val
>WENV183722910
PDYJ01000001
82054
Verrucomicrobiota
GTA
Tyr
>WENV183722894
PDYJ01000001
246677
Verrucomicrobiota
CTT
Lys
>WENV183722893
PDYJ01000001
246677
Verrucomicrobiota
CTT
Lys
>WENV183722882
PDYJ01000001
344844
Verrucomicrobiota
GCA
Cys
>WENV183722904
PDYJ01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV183722874
PDYJ01000001
344845
Verrucomicrobiota
CTG
Gln
>WENV183722898
PDYJ01000001
128202
Verrucomicrobiota
GTC
Asp
>WENV183722886
PDYJ01000001
128202
Verrucomicrobiota
GTC
Asp
>WENV183722905
PDYJ01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV183722876
PDYJ01000001
46246
Verrucomicrobiota
TGA
Ser
>WENV183722903
PDYJ01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV183722895
PDYJ01000001
246700
Verrucomicrobiota
TTC
Glu
>WENV183722878
PDYJ01000001
246700
Verrucomicrobiota
TTC
Glu
>WENV183722884
PDYJ01000001
246687
Verrucomicrobiota
CGC
Ala
>WENV183722865
PDYJ01000001
419909
Verrucomicrobiota
TCC
Gly
>WENV183722900
PDYJ01000001
344841
Verrucomicrobiota
CAC
Val
>WENV183722861
PDYJ01000001
60880
Verrucomicrobiota
CAG
Leu
>WENV183722869
PDYJ01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV183722892
PDYJ01000001
344842
Verrucomicrobiota
CGT
Thr
>WENV183722860
PDYJ01000001
170105
Verrucomicrobiota
CAT
Met
>WENV183722908
PDYJ01000001
287733
Verrucomicrobiota
CCA
Trp
>WENV183722883
PDYJ01000001
345123
Verrucomicrobiota
TGT
Thr
>WENV183722868
PDYJ01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV183722879
PDYJ01000001
344839
Verrucomicrobiota
GTG
His
>WENV183722864
PDYJ01000001
7274
Verrucomicrobiota
CGA
Ser
>WENV183722870
PDYJ01000001
246260
Verrucomicrobiota
>WENV183722885
PDYJ01000001
155268
Verrucomicrobiota
CGG
Pro
>WENV183722881
PDYJ01000001
82181
Verrucomicrobiota
AAG
Leu
>WENV183722866
PDYJ01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV183722871
PDYJ01000001
7256
Verrucomicrobiota
GCT
Ser
>WENV183722896
PDYJ01000001
345115
Verrucomicrobiota
CAT
Met
>WENV183722897
PDYJ01000001
345119
Verrucomicrobiota
TAC
Val
>WENV183722909
PDYJ01000001
345124
Verrucomicrobiota
GTT
Asn
>WENV183722887
PDYJ01000001
17023
Verrucomicrobiota
GGA
Ser
>WENV183722877
PDYJ01000001
368497
Verrucomicrobiota
GCC
Gly
>WENV183722872
PDYJ01000001
368497
Verrucomicrobiota
GCC
Gly
>WENV183722906
PDYJ01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV183722880
PDYJ01000001
246709
Verrucomicrobiota
CAT
Met
>WENV183722867
PDYJ01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV183722907
PDYJ01000001
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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