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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078830
AAQL01002047
451658
Actinomycetota
CCG
Arg
>WENV078940
AAQL01007917
270710
Actinomycetota
CAT
Met
>WENV078964
AAQL01008803
270486
Actinomycetota
CGG
Pro
>WENV078895
AAQL01005907
451659
Actinomycetota
CCT
Arg
>WENV078990
AAQL01010194
466803
Actinomycetota
CTT
Lys
>WENV078873
AAQL01004709
451655
Actinomycetota
CCA
Trp
>WENV078998
AAQL01010635
466795
Actinomycetota
GCC
Gly
>WENV078860
AAQL01003771
779444
Actinomycetota
TTG
Gln
>WENV079037
AAQL01011554
451418
Actinomycetota
CCT
Arg
>WENV079013
AAQL01011229
86885
Actinomycetota
GGA
Ser
>WENV079060
AAQL01011918
270520
Actinomycetota
CAT
Met
>WENV078871
AAQL01004576
270706
Actinomycetota
TGT
Thr
>WENV079009
AAQL01011085
270468
Actinomycetota
GAT
Ile
>WENV078844
AAQL01002690
270468
Actinomycetota
GAT
Ile
>WENV078842
AAQL01002690
270468
Actinomycetota
GAT
Ile
>WENV078997
AAQL01010541
466731
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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