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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080165
AATO01010583
780573
Betaproteobacteria
TCC
Gly
>WENV080214
AATO01013219
655629
Betaproteobacteria
CAC
Val
>WENV080200
AATO01011982
282056
Betaproteobacteria
CAT
Met
>WENV080189
AATO01011435
465310
Betaproteobacteria
TGC
Ala
>WENV080223
AATO01013764
180620
Betaproteobacteria
GAG
Leu
>WENV079975
AATO01000096
455929
Betaproteobacteria
GCC
Gly
>WENV079991
AATO01000214
455929
Betaproteobacteria
GCC
Gly
>WENV080009
AATO01000562
455929
Betaproteobacteria
GCC
Gly
>WENV080109
AATO01005751
455929
Betaproteobacteria
GCC
Gly
>WENV080194
AATO01011671
455929
Betaproteobacteria
GCC
Gly
>WENV080074
AATO01003330
780079
Betaproteobacteria
TCC
Gly
>WENV079956
AATO01000009
465080
Betaproteobacteria
GGC
Ala
>WENV080011
AATO01000608
465080
Betaproteobacteria
GGC
Ala
>WENV080013
AATO01000615
465080
Betaproteobacteria
GGC
Ala
>WENV080135
AATO01008292
465080
Betaproteobacteria
GGC
Ala
>WENV080219
AATO01013424
282068
Betaproteobacteria
TTG
Gln
>WENV080188
AATO01011435
289669
Betaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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