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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09004161
ADKJ01000432
456531
Deinococcota
CTT
Lys
>ENV09004192
ADKJ01001500
780601
Deinococcota
TTG
Gln
>ENV09004195
ADKJ01001516
275268
Deinococcota
GAT
Ile
>ENV09004149
ADKJ01000087
456540
Deinococcota
TTT
Lys
>ENV09004185
ADKJ01001271
456543
Deinococcota
TCC
Gly
>ENV09004153
ADKJ01000123
655871
Deinococcota
GCA
Cys
>ENV09004186
ADKJ01001271
463223
Deinococcota
TCT
Arg
>ENV09004158
ADKJ01000347
8304
Deinococcota
GGA
Ser
>ENV09004201
ADKJ01001591
655873
Deinococcota
CAC
Val
>ENV09004184
ADKJ01001271
275269
Deinococcota
TGG
Pro
>ENV09004150
ADKJ01000087
655869
Deinococcota
CTC
Glu
>ENV09004154
ADKJ01000123
275259
Deinococcota
GAC
Val
>ENV09004172
ADKJ01000838
275261
Deinococcota
GTG
His
>ENV09004193
ADKJ01001509
456538
Deinococcota
CGC
Ala
>ENV09004200
ADKJ01001553
113097
Deinococcota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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