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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100377
AERA01001033
659595
Alphaproteobacteria
TTG
Gln
>WENV170000019
AERA01001033
659595
Alphaproteobacteria
TTG
Gln
>WENV11100382
AERA01001185
287552
Alphaproteobacteria
GAT
Ile
>WENV170000024
AERA01001185
287552
Alphaproteobacteria
GAT
Ile
>WENV11100447
AERA01008405
270798
Alphaproteobacteria
CGG
Pro
>WENV170000089
AERA01008405
270798
Alphaproteobacteria
CGG
Pro
>WENV11100483
AERA01013761
653813
Alphaproteobacteria
GAC
Val
>WENV170000125
AERA01013761
653813
Alphaproteobacteria
GAC
Val
>WENV11100512
AERA01018117
654791
Alphaproteobacteria
CTC
Glu
>WENV170000154
AERA01018117
654791
Alphaproteobacteria
CTC
Glu
>WENV11100545
AERA01021665
686623
Alphaproteobacteria
TAC
Val
>WENV170000187
AERA01021665
686623
Alphaproteobacteria
TAC
Val
>WENV11100576
AERA01026994
663664
Alphaproteobacteria
GAC
Val
>WENV170000218
AERA01026994
663664
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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